RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 VOPP1Q96AW1 172 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 INTS12Q96CB8 462 aaKnown RBP4.32□□□□□ -1.72
LRCH3-214ENST00000473177 TM4SF19Q96DZ7 209 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 SMIM10Q96HG1 83 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 OR1F2PQ96R84 312 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 OR8B4Q96RC9 309 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 NMNAT3Q96T66 252 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 PFDN5Q99471 154 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 NRIP2Q9BQI9 281 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 LRRC61Q9BV99 259 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 MS4A7Q9GZW8 240 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-214ENST00000473177 TOLLIPQ9H0E2 274 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 METTL8Q9H825 291 aaKnown RBP4.32□□□□□ -1.72
LRCH3-214ENST00000473177 MOB1AQ9H8S9 216 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 SYNPO2LQ9H987 977 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 TAF9BQ9HBM6 251 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 KCNJ16Q9NPI9 418 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 NIT2Q9NQR4 276 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 SIRT7Q9NRC8 400 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 GSN-AS1Q9NRJ2 163 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 UBQLN4Q9NRR5 601 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 C1orf123Q9NWV4 160 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 PLAGL1Q9UM63 463 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 C14orf166Q9Y224 244 aaKnown RBP4.32□□□□□ -1.72
LRCH3-214ENST00000473177 FARSAQ9Y285 508 aaKnown RBP4.32□□□□□ -1.72
LRCH3-214ENST00000473177 OR10H1Q9Y4A9 318 aa4.32□□□□□ -1.72
LRCH3-214ENST00000473177 FLNCQ14315 2725 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 NINQ8N4C6 2090 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 LRRK1Q38SD2 2015 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 A0A0B4J203 849 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 A0A0G2JN53 185 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 TMEM72A0PK05 275 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 POM121BA6NF01 834 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ARGFXA6NJG6 315 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 CEACAM18A8MTB9 384 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SEC14L6B5MCN3 397 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 K7EPK0 472 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 HSPA12AO43301 675 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 DOK2O60496 412 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 CA11O75493 328 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 EIF3GO75821 320 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SFT2D2O95562 160 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PCCBP05166 539 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 GYPBP06028 91 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 CD5P06127 495 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 FBP1P09467 338 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SFTA3P0C7M3 94 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SEC11BP0C7V7 166 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PGAM2P15259 253 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 RCC1P18754 421 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 RAB4AP20338 218 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 RAB5AP20339 215 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 AGAP20933 346 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 MST1P26927 711 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 LAP3P28838 519 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 MAS1LP35410 378 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 RBMXP38159 391 aaKnown RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 AQP2P41181 271 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ACAA2P42765 397 aaKnown RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PTGFRP43088 359 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 HAAOP46952 286 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SOX2P48431 317 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 KCNJ3P48549 501 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 BLKP51451 505 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SOX8P57073 446 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 RAB38P57729 211 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SRPXP78539 464 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 OC90Q02509 493 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ZFP36L1Q07352 338 aaKnown RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 HNF4GQ14541 408 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PRICKLE4Q2TBC4 344 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 Q3ZCU0 254 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 C14orf28Q4W4Y0 310 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PRR30Q53SZ7 412 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-214ENST00000473177 LY6G6FQ5SQ64 297 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 GLYATL3Q5SZD4 288 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 DCAF12Q5T6F0 453 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 DCAF12L2Q5VW00 463 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 NKAIN2Q5VXU1 208 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 TMEM225Q6GV28 225 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 FAM166AQ6J272 317 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 MTFR2Q6P444 385 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SPNS3Q6ZMD2 512 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ZNF600Q6ZNG1 722 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 KCTD9Q7L273 389 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 SSX6Q7RTT6 188 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 TRAPPC6BQ86SZ2 158 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 GKN2Q86XP6 184 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 FAM71E2Q8N5Q1 922 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 ZNF614Q8N883 585 aa4.31□□□□□ -1.72
LRCH3-214ENST00000473177 PNLDC1Q8NA58 520 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms