RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TOP3AQ13472 1001 aaPredicted RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 GALEQ14376 348 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 KIR3DS1Q14943 382 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 MAPK11Q15759 364 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 GUCA2BQ16661 112 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 GFOD2Q3B7J2 385 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 RPS26P11Q5JNZ5 115 aaPredicted RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 C3orf62Q6ZUJ4 267 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 NAA40Q86UY6 237 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ANKRD46Q86W74 232 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ABHD12Q8N2K0 398 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 C17orf53Q8N3J3 647 aaPredicted RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 OR56B2PQ8NGI1 322 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 OR10Z1Q8NGY1 313 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 OR2AE1Q8NHA4 323 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF596Q8TC21 504 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 LRRC8CQ8TDW0 803 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CASTOR1Q8WTX7 329 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 SGTBQ96EQ0 304 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 HRASLS5Q96KN8 279 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF714Q96N38 554 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 SLC35A5Q9BS91 424 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 TLNRD1Q9H1K6 362 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 DPH5Q9H2P9 285 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 SP140LQ9H930 580 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 INIPQ9NRY2 104 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 LIN7CQ9NUP9 197 aaKnown RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ARGLU1Q9NWB6 273 aaPredicted RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ATPIF1Q9UII2 106 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 PPP2R2CQ9Y2T4 447 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 A0A0B4J2E0 115 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 A0A1B0GX12 115 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ERICH4A6NGS2 130 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ANKRD30BLA7E2S9 258 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 PGRMC1O00264 195 aaKnown RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 KPNA4O00629 521 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 IGLV1-40P01703 118 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 AMBPP02760 352 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 CSN3P07498 182 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 FAM153BP0C7A2 387 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ACSM4P0C7M7 580 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ASAH2BP0C7U1 165 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 TROVE2P10155 538 aaKnown RBP eCLIP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 H2AFXP16104 143 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 GPR4P46093 362 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 GTF2A1P52655 376 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 CLNS1AP54105 237 aaKnown RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 CDH12P55289 794 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 EDDM3BP56851 147 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ACTBP60709 375 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 NCALDP61601 193 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 RAB40BQ12829 278 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 APOFQ13790 326 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 RBM39Q14498 530 aaKnown RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ICAM4Q14773 271 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 RSPO1Q2MKA7 263 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 TGIF2LXQ8IUE1 241 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 TMEM139Q8IV31 216 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 TMEM151AQ8N4L1 468 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF561Q8N587 486 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 CD177Q8N6Q3 437 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 TMEM163Q8TC26 289 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 PBKQ96KB5 322 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 COQ7Q99807 217 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 NDUFAF3Q9BU61 184 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ALG12Q9BV10 488 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 C11orf68Q9H3H3 251 aaKnown RBP4.82□□□□□ -1.64
HDAC3-206ENST00000471968 GSTO2Q9H4Y5 243 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 CCDC134Q9H6E4 229 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 OR6C3Q9NZP0 311 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 GIMAP2Q9UG22 337 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF229Q9UJW7 825 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 RPS6KA6Q9UK32 745 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 JRKLQ9Y4A0 524 aa4.82□□□□□ -1.64
HDAC3-206ENST00000471968 RFPL4AA6NLU0 287 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 RFPL4AL1F8VTS6 287 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 BUB1B-PAK6H3BSN5 160 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 UBE2CO00762 179 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 ARPC1BO15143 372 aaKnown RBP4.81□□□□□ -1.64
HDAC3-206ENST00000471968 LYPLA1O75608 230 aaPredicted RBP4.81□□□□□ -1.64
HDAC3-206ENST00000471968 MMP23AO75900 390 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 CD74P04233 296 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 BCHEP06276 602 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 LINC00032P0C843 101 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 TAC1P20366 129 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 AQP2P41181 271 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 PAFAH1B1P43034 410 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 KIR2DS2P43631 304 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 SYNJ2BPP57105 145 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 OR1Q1Q15612 314 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 Q6ZTC4 211 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 CYS1Q717R9 158 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 TCF23Q7RTU1 214 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 SLC16A13Q7RTY0 426 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 Q8N9W7 124 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 OR2K2Q8NGT1 345 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 SLC35B4Q969S0 331 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms