RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 C17orf50Q8WW18 174 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 TTTY10Q9BZA0 68 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 OR51I2Q9H344 312 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 YY1AP1Q9H869 796 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 ZNF222Q9UK12 451 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 MAB21L2Q9Y586 359 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 ANGPTL7O43827 346 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 MRPL3P09001 348 aaKnown RBP17.19■□□□□ 0.34
COL9A3-207ENST00000467819 PRKACGP22612 351 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 SLC2A5P22732 501 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 LY6EQ16553 131 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 CEACAM21Q3KPI0 293 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 HCP5Q6MZN7 132 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 MOB3CQ70IA8 216 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 THAP5Q7Z6K1 395 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 BEND2Q8NDZ0 799 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 FAM206AQ9NX38 181 aa17.19■□□□□ 0.34
COL9A3-207ENST00000467819 SF3B6Q9Y3B4 125 aaKnown RBP17.19■□□□□ 0.34
COL9A3-207ENST00000467819 TRBV23-1A0A0A0MS06 115 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 A0A0U1RQV5 110 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 TMEM269A0A1B0GVZ9 245 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 T-ENOLP0DO92 83 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 FAHP16930 419 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 GABRA5P31644 462 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 PLCXD3Q63HM9 321 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 KCTD18Q6PI47 426 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-207ENST00000467819 HAGHLQ6PII5 290 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-207ENST00000467819 TRPM8Q7Z2W7 1104 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 OR51G2Q8NGK0 314 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 OR5D13Q8NGL4 314 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 ZNF671Q8TAW3 534 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 OR51E1Q8TCB6 317 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 AQP3Q92482 292 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 RORBQ92753 470 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 SSX3Q99909 188 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 THTPAQ9BU02 230 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 YIPF3Q9GZM5 350 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 GPR84Q9NQS5 396 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 C19orf12Q9NSK7 152 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 SIGLEC9Q9Y336 463 aa17.18■□□□□ 0.34
COL9A3-207ENST00000467819 A0A0G2JK05 382 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 OR5B21A6NL26 309 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 CSF1P09603 554 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 PAX6P26367 422 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 RIPPLY1Q0D2K3 151 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 OR5A2Q8NGI9 324 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 SDSLQ96GA7 329 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 ZNF488Q96MN9 340 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 TEX12Q9BXU0 123 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 MROQ9BYG7 248 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 PBOV1Q9GZY1 135 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 SLC25A19Q9HC21 320 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 TVP23BQ9NYZ1 205 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 PIGLQ9Y2B2 252 aa17.17■□□□□ 0.34
COL9A3-207ENST00000467819 ACOD1A6NK06 481 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 AQP12BA6NM10 295 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 PRR32B1ATL7 298 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 GSC2O15499 205 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 SNAPC1Q16533 368 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 HIST2H2BDQ6DRA6 164 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 DEGS2Q6QHC5 323 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 ACP7Q6ZNF0 438 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 KRT74Q7RTS7 529 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 AQP12AQ8IXF9 295 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 MKXQ8IYA7 352 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 PPP1R35Q8TAP8 253 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 PPP1R14AQ96A00 147 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 TEAD3Q99594 435 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 FBLN5Q9UBX5 448 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 COPS3Q9UNS2 423 aa17.16■□□□□ 0.34
COL9A3-207ENST00000467819 PLXNB1O43157 2135 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 CCDC182A6NF36 153 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 RFPL4AA6NLU0 287 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 RFPL4AL1F8VTS6 287 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 ANXA8P13928 327 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 ATP6V1B1P15313 513 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 CEBPDP49716 269 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-207ENST00000467819 MFGE8Q08431 387 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-207ENST00000467819 LRRC75BQ2VPJ9 315 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 SMIM21Q3B7S5 101 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 Q6ZTK2 550 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 CD177Q8N6Q3 437 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 POC1AQ8NBT0 407 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 CCDC197Q8NCU1 140 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 OR8B4Q96RC9 309 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 FAM234AQ9H0X4 552 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 RASL12Q9NYN1 266 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 ENPP5Q9UJA9 477 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 IKZF2Q9UKS7 526 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 GTF2A1LQ9UNN4 478 aa17.15■□□□□ 0.34
COL9A3-207ENST00000467819 DSCAML1Q8TD84 2053 aa17.14■□□□□ 0.33
COL9A3-207ENST00000467819 SYNGR1O43759 233 aa17.14■□□□□ 0.33
COL9A3-207ENST00000467819 MTRF1O75570 445 aaKnown RBP17.14■□□□□ 0.33
COL9A3-207ENST00000467819 NRASP01111 189 aa17.14■□□□□ 0.33
COL9A3-207ENST00000467819 IGLV3-1P01715 115 aa17.14■□□□□ 0.33
COL9A3-207ENST00000467819 RIDAP52758 137 aaKnown RBP17.14■□□□□ 0.33
COL9A3-207ENST00000467819 HERPUD1Q15011 391 aa17.14■□□□□ 0.33
COL9A3-207ENST00000467819 ZNF829Q3KNS6 432 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-207ENST00000467819 ZNF684Q5T5D7 378 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms