RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ZNF154Q13106 437 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 SPHARQ15513 63 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 UBE2V2Q15819 145 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 CR1LQ2VPA4 569 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 PLCXD3Q63HM9 321 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 OR13C3Q8NGS6 347 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 GHSRQ92847 366 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 PGLYRP3Q96LB9 341 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 CHST5Q9GZS9 411 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 TLNRD1Q9H1K6 362 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 FN3KRPQ9HA64 309 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 ZNF281Q9Y2X9 895 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 WIPI2Q9Y4P8 454 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 NPTNQ9Y639 398 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 IGHV4-61A0A0C4DH41 118 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 ANKRD61A6NGH8 418 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 TMEM210A6NLX4 147 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 ZNF732B4DXR9 585 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 MRPS14O60783 128 aaKnown RBP16.04■□□□□ 0.16
USP11-205ENST00000467378 CYB5R3P00387 301 aaPredicted RBP16.04■□□□□ 0.16
USP11-205ENST00000467378 TGFAP01135 160 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 CD1AP06126 327 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 MAP2K4P45985 399 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 GNG3P63215 75 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 MED22Q15528 200 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 AVPI1Q5T686 147 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 ZNF826PQ6ZT77 177 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 PP6455Q8WZ26 134 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 RAB1CQ92928 201 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 C1orf123Q9NWV4 160 aa16.04■□□□□ 0.16
USP11-205ENST00000467378 OR5B21A6NL26 309 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 WNT9BO14905 357 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 CELP19835 753 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 SRP14P37108 136 aaKnown RBP16.03■□□□□ 0.16
USP11-205ENST00000467378 GPM6AP51674 278 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 RPS11P62280 158 aaKnown RBP eCLIP16.03■□□□□ 0.16
USP11-205ENST00000467378 KCTD8Q6ZWB6 473 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 OR11L1Q8NGX0 322 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 GPR148Q8TDV2 347 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 OR51I2Q9H344 312 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 RNF7Q9UBF6 113 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 DHDHQ9UQ10 334 aa16.03■□□□□ 0.16
USP11-205ENST00000467378 PNMA8CA0A1B0GUJ8 204 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 PQLC2LA1A4F0 135 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 A6NLC8 198 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 LRRC30A6NM36 301 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 CDIPTO14735 213 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 GATBO75879 557 aaKnown RBP16.02■□□□□ 0.16
USP11-205ENST00000467378 SERPINA3P01011 423 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 LHBP01229 141 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 IGHV2-70P01814 119 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 ZNF20P17024 532 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 TBCEQ15813 527 aaPredicted RBP16.02■□□□□ 0.16
USP11-205ENST00000467378 UTS2BQ765I0 119 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 PEG10Q86TG7 708 aaKnown RBP16.02■□□□□ 0.16
USP11-205ENST00000467378 PARP16Q8N5Y8 322 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 C3orf56Q8N813 242 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 SCCPDHQ8NBX0 429 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 RPL3LQ92901 407 aaKnown RBP16.02■□□□□ 0.16
USP11-205ENST00000467378 HPS1Q92902 700 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 TIMD4Q96H15 378 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 ISYNA1Q9NPH2 558 aa16.02■□□□□ 0.16
USP11-205ENST00000467378 IGKV1-9A0A0C4DH69 117 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 TRBV5-5A0A0J9YX44 114 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 LRP5LA4QPB2 252 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 IRF2P14316 349 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 ATF1P18846 271 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 CFHR2P36980 270 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 HOXA4Q00056 320 aaPredicted RBP16.01■□□□□ 0.15
USP11-205ENST00000467378 EMX1Q04741 257 aaPredicted RBP16.01■□□□□ 0.15
USP11-205ENST00000467378 YIF1BQ5BJH7 314 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 FAM201AQ5SY85 155 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 WDR82Q6UXN9 313 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 LRRC28Q86X40 367 aaPredicted RBP16.01■□□□□ 0.15
USP11-205ENST00000467378 SERPINA12Q8IW75 414 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 C1orf87Q8N0U7 546 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 GCSAMQ8N6F7 178 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 OR13C5Q8NGS8 318 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 CLDND2Q8NHS1 167 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 TSEN15Q8WW01 171 aaKnown RBP16.01■□□□□ 0.15
USP11-205ENST00000467378 TECTBQ96PL2 329 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 METTL17Q9H7H0 456 aaPredicted RBP16.01■□□□□ 0.15
USP11-205ENST00000467378 ACOT13Q9NPJ3 140 aa16.01■□□□□ 0.15
USP11-205ENST00000467378 PPIAL4EA0A075B759 164 aa16■□□□□ 0.15
USP11-205ENST00000467378 PPIAL4DF5H284 164 aa16■□□□□ 0.15
USP11-205ENST00000467378 FSTL3O95633 263 aa16■□□□□ 0.15
USP11-205ENST00000467378 PPIAL4FP0DN26 164 aa16■□□□□ 0.15
USP11-205ENST00000467378 SOX2P48431 317 aa16■□□□□ 0.15
USP11-205ENST00000467378 FUT6P51993 359 aa16■□□□□ 0.15
USP11-205ENST00000467378 CHN2P52757 468 aa16■□□□□ 0.15
USP11-205ENST00000467378 BTG1P62324 171 aa16■□□□□ 0.15
USP11-205ENST00000467378 ACTG1P63261 375 aa16■□□□□ 0.15
USP11-205ENST00000467378 GPR50Q13585 617 aa16■□□□□ 0.15
USP11-205ENST00000467378 ZMYND11Q15326 602 aa16■□□□□ 0.15
USP11-205ENST00000467378 ASPHD2Q6ICH7 369 aa16■□□□□ 0.15
USP11-205ENST00000467378 SPARTQ8N0X7 666 aa16■□□□□ 0.15
USP11-205ENST00000467378 OR10Z1Q8NGY1 313 aa16■□□□□ 0.15
USP11-205ENST00000467378 TRMT10AQ8TBZ6 339 aaKnown RBP16■□□□□ 0.15
USP11-205ENST00000467378 ZCCHC4Q9H5U6 513 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms