RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 APOFQ13790 326 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 C2orf68Q2NKX9 166 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 PDLIM3Q53GG5 364 aaPredicted RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 ZNF684Q5T5D7 378 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 WDR86Q86TI4 376 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 CALHM1Q8IU99 346 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 ADGRG5Q8IZF4 528 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 ZNF561Q8N587 486 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 IQCF1Q8N6M8 205 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 FAM216BQ8N7L0 139 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 BEND2Q8NDZ0 799 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 CCDC54Q8NEL0 328 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 OR5T2Q8NGG2 359 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 OR8B12Q8NGG6 310 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 CANT1Q8WVQ1 401 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 RPL3LQ92901 407 aaKnown RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 CCDC124Q96CT7 223 aaKnown RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 DUS3LQ96G46 650 aaKnown RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 SDSLQ96GA7 329 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 OR51I2Q9H344 312 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 MOB1AQ9H8S9 216 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 SLC25A19Q9HC21 320 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 PAPOLBQ9NRJ5 636 aaKnown RBP5.81□□□□□ -1.48
VPS41-208ENST00000448833 ZNRD1Q9P1U0 126 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 ZNF319Q9P2F9 582 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 FBLN5Q9UBX5 448 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 VWFP04275 2813 aa5.81□□□□□ -1.48
VPS41-208ENST00000448833 DSCAML1Q8TD84 2053 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SLC22A31A6NKX4 558 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 RNASEK-C17orf49H0YIS7 233 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 DLGAP1O14490 977 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 ST8SIA5O15466 376 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 AKR7A2O43488 359 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SELENOFO60613 162 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 NOS1APO75052 506 aaPredicted RBP5.8□□□□□ -1.48
VPS41-208ENST00000448833 DHRS3O75911 302 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 NRASP01111 189 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 T-ENOLP0DO92 83 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 PSG2P11465 335 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SLC2A5P22732 501 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 ACKR3P25106 362 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SAA4P35542 130 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 RASSF2P50749 326 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 CAPZA1P52907 286 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 CRISP1P54107 249 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 GYS2P54840 703 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 CBX1P83916 185 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 EGR3Q06889 387 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 FLOT2Q14254 428 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 CLVS2Q5SYC1 327 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 PLCXD3Q63HM9 321 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 Q6ZTK2 550 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 MOB3CQ70IA8 216 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SPATA24Q86W54 205 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 PDZD9Q8IXQ8 264 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 Q8N7P7 452 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 OR51G2Q8NGK0 314 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 OR4C13Q8NGP0 309 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 OR5K1Q8NHB7 308 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 GAFA1Q96PS6 74 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 AMELYQ99218 206 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 RBM4BQ9BQ04 359 aaKnown RBP5.8□□□□□ -1.48
VPS41-208ENST00000448833 CDCA4Q9BXL8 241 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 PBOV1Q9GZY1 135 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 MEGF9Q9H1U4 602 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 WDR13Q9H1Z4 485 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 RANBP3Q9H6Z4 567 aaPredicted RBP5.8□□□□□ -1.48
VPS41-208ENST00000448833 SIRT7Q9NRC8 400 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SNTG1Q9NSN8 517 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 VNN3Q9NY84 501 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 TVP23BQ9NYZ1 205 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 USE1Q9NZ43 259 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 NUFIP1Q9UHK0 495 aaKnown RBP5.8□□□□□ -1.48
VPS41-208ENST00000448833 PIGLQ9Y2B2 252 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 SNX5Q9Y5X3 404 aa5.8□□□□□ -1.48
VPS41-208ENST00000448833 IGKV1D-17A0A075B6S4 117 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 LOC110117498-PIK3R3F6TDL0 507 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 J3QT63 122 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 FKBP6O75344 327 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 FCN3O75636 299 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 NXPH2O95156 264 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 SERPINA3P01011 423 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 RBP4P02753 201 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 ANOS1P23352 680 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 GABRA5P31644 462 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 PRDX2P32119 198 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 KIR2DS4P43632 304 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 GMFBP60983 142 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 RPL31P62899 125 aaKnown RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 HOXA4Q00056 320 aaPredicted RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 PTGES3Q15185 160 aaKnown RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 DGUOKQ16854 277 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 NXNL2Q5VZ03 156 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 ASPHD2Q6ICH7 369 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 HAGHLQ6PII5 290 aaPredicted RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 Q6ZSV7 163 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 MEPCEQ7L2J0 689 aaKnown RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 TRPM8Q7Z2W7 1104 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 GID4Q8IVV7 300 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms