RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ACSM2AQ08AH3 577 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 DLG1Q12959 904 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HSPB3Q12988 150 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CALCOCO2Q13137 446 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SCARB2Q14108 478 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 FASTKD3Q14CZ7 662 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 OR8B8Q15620 311 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SSX2Q16385 188 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF181Q2M3W8 571 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SOHLH1Q5JUK2 328 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SAPCD1Q5SSQ6 148 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 LDLRAD2Q5SZI1 272 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 DCST2Q5T1A1 773 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ATAD3BQ5T9A4 648 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HES5Q5TA89 166 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 NCR3LG1Q68D85 454 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ACSM6Q6P461 480 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 Q6ZR54 194 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 C20orf196Q8IYI0 205 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 OR1J2Q8NGS2 313 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 C2CD4CQ8TF44 421 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 BORCS5Q969J3 196 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 TAMM41Q96BW9 452 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 DDIT4LQ96D03 193 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 C7orf34Q96L11 122 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ZIM3Q96PE6 472 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ELAC2Q9BQ52 826 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 EMC6Q9BV81 110 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ALG9Q9H6U8 611 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CAB39LQ9H9S4 337 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PLEKHA3Q9HB20 300 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ZC4H2Q9NQZ6 224 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ABHD10Q9NUJ1 306 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 UFSP2Q9NUQ7 469 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 ACTR3BQ9P1U1 418 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 RASD1Q9Y272 281 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 UTP11Q9Y3A2 253 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 LOC100509620A0A075B734 347 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 IGHV3OR15-7A0A075B7D8 119 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM120BA0PK00 339 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 C5orf49A4QMS7 147 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 F8W036 122 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 H3BSA7 217 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 TRMUO75648 421 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 CCNKO75909 580 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 OR7A10O76100 309 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 NDUFB8O95169 186 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 CSTAP01040 98 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 APOC1P02654 83 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 INHBAP08476 426 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ZCCHC18P0CG32 403 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 PRG2P13727 222 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 IRF2P14316 349 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 COX7A1P24310 79 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 BMI1P35226 326 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 APLNRP35414 380 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 OR3A3P47888 321 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 SOX2P48431 317 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 POLR2HP52434 150 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 SPCS3P61009 180 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF141Q15928 474 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 MAPK14Q16539 360 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 DUSP7Q16829 419 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 TNFAIP8L3Q5GJ75 292 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 SPANXN3Q5MJ09 141 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 FAM71E1Q6IPT2 247 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ZCCHC12Q6PEW1 402 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 DEGS2Q6QHC5 323 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF767PQ75MW2 155 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ASRGL1Q7L266 308 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 OLIG3Q7RTU3 272 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ISCA2Q86U28 154 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 ERI1Q8IV48 349 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 SLC30A8Q8IWU4 369 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 C1orf87Q8N0U7 546 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 POM121L12Q8N7R1 296 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 MINDY2Q8NBR6 621 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 C11orf65Q8NCR3 313 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC20Q8TCA0 184 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 H1FXQ92522 213 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 DLX4Q92988 240 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 CMBLQ96DG6 245 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 SNX22Q96L94 193 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 UBXN10Q96LJ8 280 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 STACQ99469 402 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 CCL13Q99616 98 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 C12orf57Q99622 126 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 CHCHD6Q9BRQ6 235 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 HCAR1Q9BXC0 346 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 RBM38Q9H0Z9 239 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 LRMDAQ9H2I8 198 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 PIGUQ9H490 435 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 METTL8Q9H825 291 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms