RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 SIRT7Q9NRC8 400 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 C1RLQ9NZP8 487 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 ZNF222Q9UK12 451 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 PIGLQ9Y2B2 252 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 MAB21L2Q9Y586 359 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 MMP24Q9Y5R2 645 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 IGKV1D-17A0A075B6S4 117 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 OR2AT4A6NND4 320 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 ZNF829Q3KNS6 432 aaPredicted RBP17.04■□□□□ 0.32
SDC1-205ENST00000447124 PRR31Q5SQ13 230 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 SSX6Q7RTT6 188 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 COMMD2Q86X83 199 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 ZDHHC13Q8IUH4 622 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 ZNF671Q8TAW3 534 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 ZNF696Q9H7X3 374 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 SLC25A10Q9UBX3 287 aaPredicted RBP17.04■□□□□ 0.32
SDC1-205ENST00000447124 R4GMQ9 66 aa17.04■□□□□ 0.32
SDC1-205ENST00000447124 A0A1B0GVI7 797 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 SLC22A31A6NKX4 558 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 RNASEK-C17orf49H0YIS7 233 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 IGHV4-59P01825 116 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 IER3P46695 156 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 GABRA2P47869 451 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 ZBTB37Q5TC79 503 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 TMEM42Q69YG0 159 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 HAGHLQ6PII5 290 aaPredicted RBP17.03■□□□□ 0.32
SDC1-205ENST00000447124 METAP1DQ6UB28 335 aaPredicted RBP17.03■□□□□ 0.32
SDC1-205ENST00000447124 ELMOD2Q8IZ81 293 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 KIR3DL3Q8N743 410 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 ZNRF1Q8ND25 227 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 OR14K1Q8NGZ2 314 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 H1FXQ92522 213 aaKnown RBP17.03■□□□□ 0.32
SDC1-205ENST00000447124 CIB1Q99828 191 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 PRRG3Q9BZD7 231 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 SLITRK2Q9H156 845 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 SEMA6AQ9H2E6 1030 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 ELL3Q9HB65 397 aaPredicted RBP17.03■□□□□ 0.32
SDC1-205ENST00000447124 CLN6Q9NWW5 311 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 ENPP5Q9UJA9 477 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 OR52A1Q9UKL2 312 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 SLC22A13Q9Y226 551 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 POMT1Q9Y6A1 747 aa17.03■□□□□ 0.32
SDC1-205ENST00000447124 A0A1W2PRD5 423 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 A0A1W2PRF3 423 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 A0A1W2PRM7 423 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 A6NIN4 97 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 NKX6-3A6NJ46 265 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 LOC110117498-PIK3R3F6TDL0 507 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 DHRS3O75911 302 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 ATP5HO75947 161 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 NRASP01111 189 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 RASSF2P50749 326 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 SRSF4Q08170 494 aaKnown RBP17.02■□□□□ 0.32
SDC1-205ENST00000447124 KLRD1Q13241 179 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 PLCXD3Q63HM9 321 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 Q6ZSR3 168 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 SSMEM1Q8WWF3 244 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 ZNF488Q96MN9 340 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 MNTQ99583 582 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 GPR173Q9NS66 373 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 V9GYS6 101 aa17.02■□□□□ 0.32
SDC1-205ENST00000447124 OR5B21A6NL26 309 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 ZNF670-ZNF695F2Z2N8 137 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 SYNGR1O43759 233 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 NDUFB7P17568 137 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 RAG2P55895 527 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 CAV3P56539 151 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 EGR3Q06889 387 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 LDLRAD3Q86YD5 345 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 PNKDQ8N490 385 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 CD177Q8N6Q3 437 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 OR51G2Q8NGK0 314 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 TBC1D15Q8TC07 691 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 SDSLQ96GA7 329 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 TBX5Q99593 518 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 GTF2A1LQ9UNN4 478 aa17.01■□□□□ 0.31
SDC1-205ENST00000447124 MTRF1O75570 445 aaKnown RBP17■□□□□ 0.31
SDC1-205ENST00000447124 NDUFA7O95182 113 aa17■□□□□ 0.31
SDC1-205ENST00000447124 CRYBA1P05813 215 aa17■□□□□ 0.31
SDC1-205ENST00000447124 CLVS2Q5SYC1 327 aa17■□□□□ 0.31
SDC1-205ENST00000447124 ZNF684Q5T5D7 378 aa17■□□□□ 0.31
SDC1-205ENST00000447124 ACP7Q6ZNF0 438 aa17■□□□□ 0.31
SDC1-205ENST00000447124 C1orf122Q6ZSJ8 110 aa17■□□□□ 0.31
SDC1-205ENST00000447124 CMTM4Q8IZR5 234 aa17■□□□□ 0.31
SDC1-205ENST00000447124 RASL12Q9NYN1 266 aa17■□□□□ 0.31
SDC1-205ENST00000447124 WARS2Q9UGM6 360 aaKnown RBP17■□□□□ 0.31
SDC1-205ENST00000447124 SNX5Q9Y5X3 404 aa17■□□□□ 0.31
SDC1-205ENST00000447124 RFPL4AA6NLU0 287 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 RFPL4AL1F8VTS6 287 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 GPR137BO60478 399 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 RPP14O95059 124 aaKnown RBP16.99■□□□□ 0.31
SDC1-205ENST00000447124 APOL3O95236 402 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 ACTR3P61158 418 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 BCL2L15Q5TBC7 163 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 HCP5Q6MZN7 132 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 GID4Q8IVV7 300 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 POC1AQ8NBT0 407 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 OR4F5Q8NH21 305 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 DYRK2Q92630 601 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms