RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GSC2O15499 205 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 SYNGR1O43759 233 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 GLRA1P23415 457 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 MAP2K3P46734 347 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 GABRA2P47869 451 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 CEBPDP49716 269 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-203ENST00000430038 DEFA6Q01524 100 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 AADACL4Q5VUY2 407 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 HIST2H2BDQ6DRA6 164 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 ASPHD2Q6ICH7 369 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 DEGS2Q6QHC5 323 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 ZNF679Q8IYX0 411 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 BATF2Q8N1L9 274 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 FTMTQ8N4E7 242 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 C11orf42Q8N5U0 333 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 CD177Q8N6Q3 437 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-203ENST00000430038 DUS3LQ96G46 650 aaKnown RBP13.97□□□□□ -0.17
CPSF4-203ENST00000430038 DMRTB1Q96MA1 342 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
CPSF4-203ENST00000430038 RNF114Q9Y508 228 aa13.97□□□□□ -0.17
CPSF4-203ENST00000430038 A0A1B0GUS0 222 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 ACOD1A6NK06 481 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 GPR37O15354 613 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 DNAJC8O75937 253 aaPredicted RBP13.96□□□□□ -0.17
CPSF4-203ENST00000430038 NDUFB7P17568 137 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 SAA4P35542 130 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 CAV3P56539 151 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 GNG3P63215 75 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 SNCBQ16143 134 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 HAGHLQ6PII5 290 aaPredicted RBP13.96□□□□□ -0.17
CPSF4-203ENST00000430038 SSX6Q7RTT6 188 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 OR5A2Q8NGI9 324 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 NRBF2Q96F24 287 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 MED30Q96HR3 178 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 ADGRL4Q9HBW9 690 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 C19orf12Q9NSK7 152 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 NUFIP1Q9UHK0 495 aaKnown RBP13.96□□□□□ -0.17
CPSF4-203ENST00000430038 PIGLQ9Y2B2 252 aa13.96□□□□□ -0.17
CPSF4-203ENST00000430038 CLPXO76031 633 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 POLR2IP36954 125 aaKnown RBP13.95□□□□□ -0.18
CPSF4-203ENST00000430038 DNAL1Q4LDG9 190 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 TMEM42Q69YG0 159 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 KCTD18Q6PI47 426 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-203ENST00000430038 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 C17orf107Q6ZR85 190 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 MEPCEQ7L2J0 689 aaKnown RBP13.95□□□□□ -0.18
CPSF4-203ENST00000430038 TCEANCQ8N8B7 351 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 OR5K1Q8NHB7 308 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 FAM81AQ8TBF8 368 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 BCAS4Q8TDM0 211 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 RORBQ92753 470 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 SDSLQ96GA7 329 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 HIST1H2AAQ96QV6 131 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 MROQ9BYG7 248 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 ABCB9Q9NP78 766 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 MRM2Q9UI43 246 aaKnown RBP13.95□□□□□ -0.18
CPSF4-203ENST00000430038 SLC22A13Q9Y226 551 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 FAM96BQ9Y3D0 163 aa13.95□□□□□ -0.18
CPSF4-203ENST00000430038 NKX6-3A6NJ46 265 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 RFPL4AA6NLU0 287 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 ZAR1LA6NP61 321 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 RFPL4AL1F8VTS6 287 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 MTRF1O75570 445 aaKnown RBP13.94□□□□□ -0.18
CPSF4-203ENST00000430038 UBE2E1P51965 193 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 CXCR4P61073 352 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 RPL15P61313 204 aaKnown RBP13.94□□□□□ -0.18
CPSF4-203ENST00000430038 RIPPLY1Q0D2K3 151 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 SLX4IPQ5VYV7 408 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 PLCXD3Q63HM9 321 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 BRICD5Q6PL45 260 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF322Q6U7Q0 402 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-203ENST00000430038 CMTM4Q8IZR5 234 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 OR14K1Q8NGZ2 314 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 PPP1R35Q8TAP8 253 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 IL4I1Q96RQ9 567 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 GPR173Q9NS66 373 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 IKZF2Q9UKS7 526 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 V9GYS6 101 aa13.94□□□□□ -0.18
CPSF4-203ENST00000430038 MEIOCA2RUB1 952 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 M0R1W7 72 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF254O75437 659 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 DHRS3O75911 302 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 NRASP01111 189 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 FBP1P09467 338 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 RIDAP52758 137 aaKnown RBP13.93□□□□□ -0.18
CPSF4-203ENST00000430038 KDM4DQ6B0I6 523 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 Q6ZSR3 168 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 AMIGO2Q86SJ2 522 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 COMMD2Q86X83 199 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 CALHM1Q8IU99 346 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 MKXQ8IYA7 352 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 ELMOD2Q8IZ81 293 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 POC1AQ8NBT0 407 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 TMEM185AQ8NFB2 350 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 NPRL2Q8WTW4 380 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 CNN2Q99439 309 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms