RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NOX4Q9NPH5 578 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 GPR84Q9NQS5 396 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 PCDHB16Q9NRJ7 776 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CHCHD3Q9NX63 227 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 DNAJB11Q9UBS4 358 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 GLS2Q9UI32 602 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 MRM2Q9UI43 246 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 HHLA2Q9UM44 414 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 COPS3Q9UNS2 423 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 PIGLQ9Y2B2 252 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 TLN2Q9Y4G6 2542 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 A0A1B0GTI1 187 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 ANKRD61A6NGH8 418 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 NKX6-3A6NJ46 265 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 TMEM212A6NML5 194 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 OR2AT4A6NND4 320 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 RNF212BA8MTL3 300 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 ZNF879B4DU55 563 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 ZNF732B4DXR9 585 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 J3QT63 122 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SLC1A7O00341 560 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 DVL1O14640 695 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 CASQ2O14958 399 aaPredicted RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 SIGLEC5O15389 551 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 TMPRSS2O15393 492 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 ENTPD6O75354 484 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 INMTO95050 263 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 BAG2O95816 211 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 PLATP00750 562 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 IGHA1P01876 353 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 CHRM2P08172 466 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 HTR1AP08908 422 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 MRPL3P09001 348 aaKnown RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 GABRB1P18505 474 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 ACKR3P25106 362 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 CD80P33681 288 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 RBP2P50120 134 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 GBX2P52951 348 aaPredicted RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 GUCA2AQ02747 115 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 GABPB1Q06547 395 aaPredicted RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 GFOD2Q3B7J2 385 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SMIM21Q3B7S5 101 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 GPR157Q5UAW9 335 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 METTL11BQ5VVY1 283 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 PRAMEF6Q5VXH4 476 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 RPL22L1Q6P5R6 122 aaKnown RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 FIP1L1Q6UN15 594 aaKnown RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 TMPRSS11AQ6ZMR5 421 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 KCTD8Q6ZWB6 473 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SERPINA12Q8IW75 414 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SAXO1Q8IYX7 474 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 TMEM86BQ8N661 226 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 POC1AQ8NBT0 407 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 DEFB108BQ8NET1 73 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 OR5D14Q8NGL3 314 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 PPP1R35Q8TAP8 253 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 RORBQ92753 470 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 DVL3Q92997 716 aaPredicted RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 RNFT2Q96EX2 444 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SDSLQ96GA7 329 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 SLC29A1Q99808 456 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 MS4A7Q9GZW8 240 aaPredicted RBP5.32□□□□□ -1.56
USP54-202ENST00000413442 COMMD4Q9H0A8 199 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 MMP26Q9NRE1 261 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 PLCXD1Q9NUJ7 323 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 NLKQ9UBE8 527 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 OPN4Q9UHM6 478 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 KLHDC2Q9Y2U9 406 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 PCDHGB5Q9Y5G0 923 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 POMT1Q9Y6A1 747 aa5.32□□□□□ -1.56
USP54-202ENST00000413442 WNK2Q9Y3S1 2297 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 A0A1B0GUS0 222 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 PQLC2LA1A4F0 135 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 FUOMA2VDF0 154 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ERICH4A6NGS2 130 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 H3BUI4 141 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 M0R1W7 72 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 TOX4O94842 621 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 KNG1P01042 644 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 AVPP01185 164 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 CD1AP06126 327 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 CD2P06729 351 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 PGA5P0DJD9 388 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 DBTP11182 482 aaKnown RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 COMPP49747 757 aaPredicted RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 GPM6AP51674 278 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ZNF85Q03923 595 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ACSM1Q08AH1 577 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 FOXL1Q12952 345 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ALKBH1Q13686 389 aaKnown RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 ZIK1Q3SY52 487 aaPredicted RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 PLCXD3Q63HM9 321 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 NCR3LG1Q68D85 454 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 STUMQ69YW2 141 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 LYPD2Q6UXB3 125 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 C1orf229Q6ZS94 237 aaPredicted RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 LHFPL2Q6ZUX7 228 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 PARP16Q8N5Y8 322 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ZSCAN4Q8NAM6 433 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms