RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 MPIP34949 423 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SOX3P41225 446 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RPL14P50914 215 aaKnown RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RAB5CP51148 216 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 MLF1P58340 268 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OC90Q02509 493 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 C2orf80Q0P641 193 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OPCMLQ14982 345 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 KIAA0040Q15053 153 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR1C1Q15619 314 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 IGFBP7Q16270 282 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 MLANAQ16655 118 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 VPS26BQ4G0F5 336 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ATP6AP1LQ52LC2 224 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 KLHL22Q53GT1 634 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SYT14P1Q58G82 188 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RNASE12Q5GAN4 147 aaKnown RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SLC25A53Q5H9E4 307 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FAM74A1Q5RGS3 127 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SPINK14Q6IE38 97 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FAM71E1Q6IPT2 247 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 IGFL2Q6UWQ7 119 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 HSDL2Q6YN16 418 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 Q6ZS92 163 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 WDR53Q7Z5U6 358 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RPS19BP1Q86WX3 136 aaKnown RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 LDLRAD3Q86YD5 345 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FUNDC1Q8IVP5 155 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PDZD9Q8IXQ8 264 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PRR22Q8IZ63 422 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 LRRC25Q8N386 305 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 GTPBP8Q8N3Z3 284 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 LRRC18Q8N456 261 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZADH2Q8N4Q0 377 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SLC5A8Q8N695 610 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 KRTCAP2Q8N6L1 136 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 C15orf54Q8N8G6 183 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF383Q8NA42 475 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 MORN4Q8NDC4 146 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR4C5Q8NGB2 326 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR4A15Q8NGL6 344 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR4C15Q8NGM1 316 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR5M1Q8NGP8 315 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR10Q1Q8NGQ4 319 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR5R1Q8NH85 324 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR5K1Q8NHB7 308 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RXFP4Q8TDU9 374 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 GPR151Q8TDV0 419 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ST8SIA1Q92185 356 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 TM9SF4Q92544 642 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 DAZLQ92904 295 aaKnown RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PNPLA2Q96AD5 504 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 MRPL53Q96EL3 112 aaKnown RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF503Q96F45 646 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 CNRIP1Q96F85 164 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 GRAMD2BQ96HH9 432 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FCRL1Q96LA6 429 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 VSTM2LQ96N03 204 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF681Q96N22 645 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SIGLEC12Q96PQ1 595 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 TEAD3Q99594 435 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PITX2Q99697 317 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF2Q9BSG1 426 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NDUFAF3Q9BU61 184 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FAIM2Q9BWQ8 316 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 DEFB126Q9BYW3 111 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PRRG3Q9BZD7 231 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 REEP4Q9H6H4 257 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 WDR55Q9H6Y2 383 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NMNAT1Q9HAN9 279 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SIRT7Q9NRC8 400 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PARPBPQ9NWS1 579 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PIPOXQ9P0Z9 390 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 FBXL2Q9UKC9 423 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 MOKQ9UQ07 419 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NTNG1Q9Y2I2 539 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RELNP78509 3460 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 CPAMD8Q8IZJ3 1885 aa3.96□□□□□ -1.77
SF3B1-202ENST00000409915 GCN1Q92616 2671 aaKnown RBP3.96□□□□□ -1.78
SF3B1-202ENST00000409915 TRAPPC13A5PLN9 417 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 A6NIZ1 184 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 OR2AT4A6NND4 320 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 A8MWP6 167 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 DIRC3C9JPN6 131 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 TSTD3H0UI37 97 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 NME4O00746 187 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 ADAM10O14672 748 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 CHEK1O14757 476 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
SF3B1-202ENST00000409915 ARPC2O15144 300 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 HSPA12AO43301 675 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 LYRM1O43325 122 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 XPNPEP2O43895 674 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 GGCTO75223 188 aaKnown RBP3.96□□□□□ -1.78
SF3B1-202ENST00000409915 NEURL1O76050 574 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 WISP2O76076 250 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 ZFAND5O76080 213 aa3.96□□□□□ -1.78
SF3B1-202ENST00000409915 IFNA17P01571 189 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms