RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 C2orf76Q3KRA6 126 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 OR2W3Q7Z3T1 314 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 DMRTC2Q8IXT2 367 aaPredicted RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 OR51D1Q8NGF3 324 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 OR4D6Q8NGJ1 314 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 KCNG3Q8TAE7 436 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 C15orf40Q8WUR7 153 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 S100A16Q96FQ6 103 aaKnown RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 DIRC2Q96SL1 478 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FZR1Q9UM11 496 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 CADP27708 2225 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 OR4A8P0C604 315 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 TMEM225BP0DP42 221 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 RAB6AP20340 208 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 TNFSF4P23510 183 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 SERPINF1P36955 418 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 GPM6AP51674 278 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 CLDN12P56749 244 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 P2RY14Q15391 338 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 PXT1Q8NFP0 134 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 SLC25A28Q96A46 364 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 PIK3IP1Q96FE7 263 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 SPACA5Q96QH8 159 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 METTL9Q9H1A3 318 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 EXTL2Q9UBQ6 330 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 OR5V1Q9UGF6 321 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 RAB22AQ9UL26 194 aa11.69□□□□□ -0.54
VAPB-202ENST00000395802 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 A0A1B0GWJ7 208 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 ISPDA4D126 451 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 CSTBP04080 98 aaKnown RBP11.68□□□□□ -0.54
VAPB-202ENST00000395802 NAT2P11245 290 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 IGFBP2P18065 325 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 HAAOP46952 286 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 PDZK1IP1Q13113 114 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 RSU1Q15404 277 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 FAM76BQ5HYJ3 339 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 SAXO1Q8IYX7 474 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 HPSE2Q8WWQ2 592 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 MRPL37Q9BZE1 423 aaKnown RBP11.68□□□□□ -0.54
VAPB-202ENST00000395802 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 CXXC4Q9H2H0 198 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 RHOFQ9HBH0 211 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 FAIMQ9NVQ4 179 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 CISD1Q9NZ45 108 aaKnown RBP11.68□□□□□ -0.54
VAPB-202ENST00000395802 TAAR3PQ9P1P4 343 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 ING4Q9UNL4 249 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 POLDIP2Q9Y2S7 368 aa11.68□□□□□ -0.54
VAPB-202ENST00000395802 A0A0A6YYH2 397 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 LRP5LA4QPB2 252 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 A6NJ64 397 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 DEFB108AA8MXU0 73 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 TPPPO94811 219 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 KDM4BO94953 1096 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 OR3A4PP47883 348 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 MMP15P51511 669 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 MADCAM1Q13477 382 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 IL18Q14116 193 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
VAPB-202ENST00000395802 ADIPOQQ15848 244 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 BAK1Q16611 211 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 RAB12Q6IQ22 244 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 CELF2-AS1Q8N7Q2 184 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 OR4M1Q8NGD0 313 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 SLC25A38Q96DW6 304 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 MRPS24Q96EL2 167 aaKnown RBP11.67□□□□□ -0.54
VAPB-202ENST00000395802 DHRS9Q9BPW9 319 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 TMEM204Q9BSN7 226 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 URM1Q9BTM9 101 aaKnown RBP11.67□□□□□ -0.54
VAPB-202ENST00000395802 PKIBQ9C010 78 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 ELL3Q9HB65 397 aaPredicted RBP11.67□□□□□ -0.54
VAPB-202ENST00000395802 DIABLOQ9NR28 239 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 RHBDL2Q9NX52 303 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 B9A039 149 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 LILRA1O75019 489 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 NR4A2P43354 598 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 ZP1P60852 638 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 PITPNAQ00169 270 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 OXA1LQ15070 435 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 EFNB3Q15768 340 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 ZNF672Q499Z4 452 aaPredicted RBP11.67□□□□□ -0.54
VAPB-202ENST00000395802 DCDC5Q6ZRR9 648 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 TMEM200AQ86VY9 491 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 ZNF611Q8N823 705 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 OR5D18Q8NGL1 313 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 OR51F2Q8NH61 342 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1700 ms