RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 ACY1Q03154 408 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 PEG10Q86TG7 708 aaKnown RBP18.08■□□□□ 0.48
CLK3-202ENST00000395066 LHFPL1Q86WI0 220 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 POC1AQ8NBT0 407 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 SPACA9Q96E40 222 aaPredicted RBP18.08■□□□□ 0.48
CLK3-202ENST00000395066 SCGB3A2Q96PL1 93 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 DEFB126Q9BYW3 111 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 SMCO4Q9NRQ5 59 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 OSGIN2Q9Y236 505 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 WDFY4Q6ZS81 3184 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 GLAP06280 429 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 RPS2P15880 293 aaKnown RBP18.07■□□□□ 0.48
CLK3-202ENST00000395066 CCL1P22362 96 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 MSX1P28360 303 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 CD80P33681 288 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 CCL7P80098 99 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 HIST3H3Q16695 136 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 FAM76BQ5HYJ3 339 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 ZNF837Q96EG3 531 aaPredicted RBP18.07■□□□□ 0.48
CLK3-202ENST00000395066 GNRHR2Q96P88 292 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 PECRQ9BY49 303 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 PISDQ9UG56 409 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 MCTS1Q9ULC4 181 aaKnown RBP18.07■□□□□ 0.48
CLK3-202ENST00000395066 PMS2P1A4D2B8 440 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 AQP7P3A6NL99 342 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 FCGR3AP08637 254 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 F2RL1P55085 397 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 NECAB3Q96P71 396 aaPredicted RBP18.07■□□□□ 0.48
CLK3-202ENST00000395066 SULT4A1Q9BR01 284 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 RARRES3Q9UL19 164 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 PI4KAP42356 2102 aa18.07■□□□□ 0.48
CLK3-202ENST00000395066 MUC3AQ02505 3323 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 TAAR5O14804 337 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 PTGER4P35408 488 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 AKIRIN2Q53H80 203 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 BTNL8Q6UX41 500 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 Q7L0L9 218 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 ZMAT5Q9UDW3 170 aaKnown RBP18.06■□□□□ 0.48
CLK3-202ENST00000395066 C9JQL5 133 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 FBXO24O75426 580 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 PNLIPP16233 465 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 ID4P47928 161 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 SULT1A2P50226 295 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 RSPO1Q2MKA7 263 aaPredicted RBP18.06■□□□□ 0.48
CLK3-202ENST00000395066 OR2A2Q6IF42 318 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 C15orf54Q8N8G6 183 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 NANPQ8TBE9 248 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 C14orf79Q96F83 325 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 JSRP1Q96MG2 331 aaPredicted RBP18.06■□□□□ 0.48
CLK3-202ENST00000395066 PHF7Q9BWX1 381 aaPredicted RBP18.06■□□□□ 0.48
CLK3-202ENST00000395066 RBM24Q9BX46 236 aaKnown RBP18.06■□□□□ 0.48
CLK3-202ENST00000395066 PIGLQ9Y2B2 252 aa18.06■□□□□ 0.48
CLK3-202ENST00000395066 DHRS7CA6NNS2 312 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 PTAFRP25105 342 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 ECH1Q13011 328 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 IL15RAQ13261 267 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 DHRS11Q6UWP2 260 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 CLEC9AQ6UXN8 241 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 B3GALT1Q9Y5Z6 326 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 CHCHD2Q9Y6H1 151 aaPredicted RBP18.05■□□□□ 0.48
CLK3-202ENST00000395066 IGLV3-32A0A0A0MS00 114 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 IGHV5-10-1A0A0J9YXX1 117 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 ANGPTL7O43827 346 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 PAX6P26367 422 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 ENDOGQ14249 297 aaKnown RBP18.05■□□□□ 0.48
CLK3-202ENST00000395066 CHRFAM7AQ494W8 412 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 ZNF385CQ66K41 422 aaPredicted RBP18.05■□□□□ 0.48
CLK3-202ENST00000395066 ETV3LQ6ZN32 361 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 OR2AE1Q8NHA4 323 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 SLC22A8Q8TCC7 542 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 OCIAD1Q9NX40 245 aa18.05■□□□□ 0.48
CLK3-202ENST00000395066 MSTNO14793 375 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 HKR1P10072 659 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 GRB2P62993 217 aaKnown RBP18.04■□□□□ 0.48
CLK3-202ENST00000395066 CHAF1BQ13112 559 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 SNAI3Q3KNW1 292 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 FAM89BQ8N5H3 189 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 ADPRHL1Q8NDY3 354 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 KIRREL1Q96J84 757 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 CLCC1Q96S66 551 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 EGLN1Q9GZT9 426 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 CHRDQ9H2X0 955 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 FOXI3A8MTJ6 420 aaPredicted RBP18.04■□□□□ 0.48
CLK3-202ENST00000395066 C1orf196B1AJZ1 125 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 FAM157AC9JC47 383 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 CSNK1A1P48729 337 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 DVL1P1P54792 670 aaPredicted RBP18.04■□□□□ 0.48
CLK3-202ENST00000395066 RRADP55042 308 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 COL19A1Q14993 1142 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 CDCP2Q5VXM1 449 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 BRICD5Q6PL45 260 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 CCDC74BQ96LY2 380 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 SMIM3Q9BZL3 60 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 PARP12Q9H0J9 701 aaKnown RBP18.04■□□□□ 0.48
CLK3-202ENST00000395066 PARP11Q9NR21 331 aa18.04■□□□□ 0.48
CLK3-202ENST00000395066 ADH6P28332 368 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SMCO1Q147U7 214 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 DYRK2Q92630 601 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 AKR1E2Q96JD6 320 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 GPR173Q9NS66 373 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms