RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EHFQ9NZC4 300 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 ZNF581Q9P0T4 197 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 MCTS1Q9ULC4 181 aaKnown RBP16.3■□□□□ 0.2
USP49-202ENST00000373010 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
USP49-202ENST00000373010 MT-CO3P00414 261 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 BEX5Q5H9J7 111 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TMEM164Q5U3C3 297 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 NAXEQ8NCW5 288 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 WBP1Q96G27 269 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 DMRTA2Q96SC8 542 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 HDHD3Q9BSH5 251 aaPredicted RBP16.3■□□□□ 0.2
USP49-202ENST00000373010 GPR87Q9BY21 358 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TNFSF18Q9UNG2 199 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TMA7Q9Y2S6 64 aaKnown RBP16.3■□□□□ 0.2
USP49-202ENST00000373010 IGKV1D-8A0A087WSZ0 117 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 C13orf42A0A1B0GVH6 325 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 LHX2P50458 406 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SLC9A3R2Q15599 337 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 OR1C1Q15619 314 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 TMEM128Q5BJH2 165 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 DCAF10Q5QP82 559 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 PDSS1Q5T2R2 415 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 C1QTNF12Q5T7M4 302 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 C9orf135Q5VTT2 229 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 DHRS13Q6UX07 377 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 MARVELD3Q96A59 401 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 Q96M66 194 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SLC6A15Q9H2J7 730 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 ZNF701Q9NV72 531 aaPredicted RBP16.29■□□□□ 0.2
USP49-202ENST00000373010 IL17BQ9UHF5 180 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 NOSIPQ9Y314 301 aaKnown RBP16.29■□□□□ 0.2
USP49-202ENST00000373010 R4GN57 208 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 C5orf51A6NDU8 294 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 DBX1A6NMT0 343 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 DHRS7CA6NNS2 312 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SERPINE3A8MV23 424 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 ZNHIT1O43257 154 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 RLN2P04090 185 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SLC25A4P12235 298 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SERPINF1P36955 418 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 ZNF92Q03936 586 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 AADACL3Q5VUY0 350 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 JMJD6Q6NYC1 403 aaPredicted RBP16.29■□□□□ 0.2
USP49-202ENST00000373010 SLC51BQ86UW2 128 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 LHFPL1Q86WI0 220 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 SPSB1Q96BD6 273 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 RTBDNQ9BSG5 229 aaPredicted RBP16.29■□□□□ 0.2
USP49-202ENST00000373010 METTL9Q9H1A3 318 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 WDR13Q9H1Z4 485 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 OSGIN2Q9Y236 505 aa16.29■□□□□ 0.2
USP49-202ENST00000373010 hCG_1807616A0A1W2PRN6 198 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 CEACAM18A8MTB9 384 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 SERPINA5P05154 406 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 CALCRP30988 508 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 MAGEA5P43359 124 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 RSU1Q15404 277 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 RGS7BPQ6MZT1 257 aaPredicted RBP16.28■□□□□ 0.2
USP49-202ENST00000373010 FIGNL2A6NMB9 653 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 C21orf140B9A014 251 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 TEX46H3BTG2 121 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 MRPL33O75394 65 aaKnown RBP16.28■□□□□ 0.2
USP49-202ENST00000373010 NRASP01111 189 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 MMP7P09237 267 aaPredicted RBP16.28■□□□□ 0.2
USP49-202ENST00000373010 FPR2P25090 351 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 CLDN18P56856 261 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 TAS2R46P59540 309 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 PCBD1P61457 104 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 FAM3AP98173 230 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 TAF9Q16594 264 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 CHRFAM7AQ494W8 412 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 PABPC1L2AQ5JQF8 200 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 SIGIRRQ6IA17 410 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 CLEC18BQ6UXF7 455 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 KCNRGQ8N5I3 272 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 TMEM185AQ8NFB2 350 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 OR5AP2Q8NGF4 316 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 RBPMSQ93062 196 aaKnown RBP16.28■□□□□ 0.2
USP49-202ENST00000373010 VRK1Q99986 396 aaPredicted RBP16.28■□□□□ 0.2
USP49-202ENST00000373010 REG4Q9BYZ8 158 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 PPA2Q9H2U2 334 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 SLC7A10Q9NS82 523 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 ZNF407Q9C0G0 2248 aa16.28■□□□□ 0.2
USP49-202ENST00000373010 A0A0D9SG52 128 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 RNF222A6NCQ9 220 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 MSTNO14793 375 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 KCNAB3O43448 404 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 CRYZL1O95825 349 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 GLRA1P23415 457 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 CNN3Q15417 329 aaKnown RBP16.27■□□□□ 0.2
USP49-202ENST00000373010 RFPL4BQ6ZWI9 263 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 PEG10Q86TG7 708 aaKnown RBP16.27■□□□□ 0.2
USP49-202ENST00000373010 TMEM17Q86X19 198 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 CPEB3Q8NE35 698 aaKnown RBP16.27■□□□□ 0.2
USP49-202ENST00000373010 ADAMTS17Q8TE56 1095 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 TMEM45BQ96B21 275 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 CDC6Q99741 560 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 TTTY12Q9BZ98 90 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 B4GALT7Q9UBV7 327 aa16.27■□□□□ 0.2
USP49-202ENST00000373010 hCG_38984A0A1B0GV85 526 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms