RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 C6orf183Q5T699 404 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 NSUN5P2Q63ZY6 315 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 OR52W1Q6IF63 320 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 OR8H3Q8N146 312 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 DPCDQ9BVM2 203 aaPredicted RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 WNT5BQ9H1J7 359 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 KCNN3Q9UGI6 736 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 EDARQ9UNE0 448 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 SLC7A11Q9UPY5 501 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 MYO7BQ6PIF6 2116 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 IGF2RP11717 2491 aa12.21□□□□□ -0.46
USF1-202ENST00000368020 NKX2-8O15522 239 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 RP2O75695 350 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 AMY2BP19961 511 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 SERPINA2P20848 420 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ANOS1P23352 680 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 SSTR2P30874 369 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 OR3A3P47888 321 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 OR3A2P47893 321 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 EXOSC2Q13868 293 aaKnown RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 OR8B8Q15620 311 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 MDS2Q8NDY4 140 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ST8SIA4Q92187 359 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 FBXW5Q969U6 566 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 BORCS8Q96FH0 119 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 C1QTNF5Q9BXJ0 243 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 PECRQ9BY49 303 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 PRRG4Q9BZD6 226 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 ZNF816-ZNF321PA0A0X1KG74 233 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 C5orf63A6NC05 138 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 EFSO43281 561 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 NRASP01111 189 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 MMP7P09237 267 aaPredicted RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 TMEM225BP0DP42 221 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 PPP3CBP16298 524 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 FPR2P25090 351 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 MAGEA5P43359 124 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 FUT6P51993 359 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ATP1B3P54709 279 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 RSU1Q15404 277 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 MICBQ29980 383 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 TMEM128Q5BJH2 165 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ASCL4Q6XD76 172 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 C3P1Q6ZMU1 363 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 TMEM251Q8N6I4 163 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 TMEM185AQ8NFB2 350 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 PXT1Q8NFP0 134 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 AKR7LQ8NHP1 331 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 NPRL2Q8WTW4 380 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 Q96M66 194 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 OPA3Q9H6K4 179 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 ELL3Q9HB65 397 aaPredicted RBP12.2□□□□□ -0.46
USF1-202ENST00000368020 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 IL36GQ9NZH8 169 aa12.2□□□□□ -0.46
USF1-202ENST00000368020 FXYD6-FXYD2A0A087WZ82 144 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 A0A0D9SG52 128 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 MPC2O95563 127 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 F10P00742 488 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 PMP2P02689 132 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 CXCL2P19875 107 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 ARR3P36575 388 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
USF1-202ENST00000368020 ESCO2Q56NI9 601 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 SFRP5Q5T4F7 317 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 TSPO2Q5TGU0 170 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 LINC00696Q6ZRV3 163 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 RFPL4BQ6ZWI9 263 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 MCEMP1Q8IX19 187 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 ZFP62Q8NB50 900 aaPredicted RBP12.19□□□□□ -0.46
USF1-202ENST00000368020 TMEM178AQ8NBL3 297 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 OR5D18Q8NGL1 313 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 PIGTQ969N2 578 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 APH1AQ96BI3 265 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 PDCD10Q9BUL8 212 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 FXYD6Q9H0Q3 95 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 GPR173Q9NS66 373 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms