RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TGFBIQ15582 683 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR4D1Q15615 310 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 TRIM40Q6P9F5 258 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 ST13P4Q8IZP2 240 aaPredicted RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 TTLQ8NG68 377 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SLC22A8Q8TCC7 542 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 ANKRD7Q92527 254 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 PIK3IP1Q96FE7 263 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CERS2Q96G23 380 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CCL19Q99731 98 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SFXN3Q9BWM7 321 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 EHD1Q9H4M9 534 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 RPF2Q9H7B2 306 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CXorf21Q9HAI6 301 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 VNN3Q9NY84 501 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 PIGLQ9Y2B2 252 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 MGAM2Q2M2H8 2515 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 MED12Q93074 2177 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 MPDZO75970 2070 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 A0A0A6YYD5 115 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 IQANK1A0A1B0GTG1 560 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 SNTNA6NMZ2 147 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 PLPP1O14494 284 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 TIMM8AO60220 97 aaPredicted RBP4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 RAMP3O60896 148 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 UGT2B11O75310 529 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 LYPLA1O75608 230 aaPredicted RBP4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 STK16O75716 305 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ATP5LO75964 103 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 LYPD3O95274 346 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ACTL6AO96019 429 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 P0C879 139 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 SLC35E2BP0CK96 405 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF708P17019 499 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 COX5AP20674 150 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 CD79BP40259 229 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ATP1B3P54709 279 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 SEC61GP60059 68 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 GUSBP1Q15486 140 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 SPANXN3Q5MJ09 141 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 PHYHD1Q5SRE7 291 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 KHDRBS2Q5VWX1 349 aaKnown RBP4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 STEAP4Q687X5 459 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 FAM45BPQ6NSW5 357 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ANGPTL8Q6UXH0 198 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 DHDDSQ86SQ9 333 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 LINC00612Q8N6U2 182 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 FAM45AQ8TCE6 357 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 MAGOHBQ96A72 148 aaKnown RBP4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 TIMD4Q96H15 378 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF184Q99676 751 aaPredicted RBP4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 KLHDC3Q9BQ90 382 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 REG4Q9BYZ8 158 aa4.06□□□□□ -1.76
RNU4-39P-201ENST00000362455 PHF3Q92576 2039 aaKnown RBP4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 IGHV7-81A0A0B4J1V7 117 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 K7N7A8 449 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 DNALI1O14645 258 aaPredicted RBP4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 AQP8O94778 261 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 TTC4O95801 387 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SERPINA3P01011 423 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SEMG1P04279 462 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SOD3P08294 240 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 AQP1P29972 269 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 NTSP30990 170 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SSR2P43308 183 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 BIDP55957 195 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 ATP5J2P56134 94 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 IRF8Q02556 426 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 LRRC74AQ0VAA2 488 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 RCAN2Q14206 197 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 NNATQ16517 81 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 DMRTC1Q5HYR2 192 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 TFAP2EQ6VUC0 442 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZBED8Q8IZ13 594 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SNX31Q8N9S9 440 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR10H4Q8NGA5 316 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR1J4Q8NGS1 313 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 RAB3IL1Q8TBN0 382 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 RNF138Q8WVD3 245 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 UBE2E3Q969T4 207 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 C10orf35Q96D05 121 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 GAL3ST1Q99999 423 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 SLC39A3Q9BRY0 314 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 MED18Q9BUE0 208 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 EFCAB11Q9BUY7 163 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 ROGDIQ9GZN7 287 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 DERL2Q9GZP9 239 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 NMUR2Q9GZQ4 415 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 YY1AP1Q9H869 796 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 TNFRSF19Q9NS68 423 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF639Q9UID6 485 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 CES1P1Q9UKY3 287 aa4.05□□□□□ -1.76
RNU4-39P-201ENST00000362455 UBXN8O00124 270 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 FOXE1O00358 373 aaPredicted RBP4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 TP53I11O14683 189 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 TNFSF11O14788 317 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 EMC8O43402 210 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CD5LO43866 347 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CBR3O75828 277 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CD8AP01732 235 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms