RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LIMS4P0CW20 117 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CCL4P13236 92 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 HIST1H1DP16402 221 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ARL16Q0P5N6 197 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 GAB4Q2WGN9 574 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 VMA21Q3ZAQ7 101 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ANKRD34AQ69YU3 496 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ZNF721Q8TF20 911 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NEIL1Q96FI4 390 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 A0A0U1RQK1 487 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 FOXS1O43638 330 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SNRNP70P08621 437 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 METTL15P1P0C7V9 234 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 COX5AP20674 150 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 RPL12P30050 165 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ZNF83P51522 516 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NUBP1P53384 320 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SCGB2A2Q13296 93 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 THNSL2Q86YJ6 484 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SUMF1Q8NBK3 374 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 APH1BQ8WW43 257 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NDFIP1Q9BT67 221 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 LPAR3Q9UBY5 353 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CYB5R1Q9UHQ9 305 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TMEM210A6NLX4 147 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 LRP3O75074 770 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 EML2O95834 649 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SOX8P57073 446 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TNFAIP6P98066 277 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 STPG1Q5TH74 334 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ZNF774Q6NX45 483 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SLC22A18ASQ8N1D0 253 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 DEFB108BQ8NET1 73 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 OR2M3Q8NG83 312 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NUDCD2Q8WVJ2 157 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 FGF11Q92914 225 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 RAB1CQ92928 201 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 PURGQ9UJV8 347 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ING1Q9UK53 422 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TIMM8BQ9Y5J9 83 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TRAV38-1A0A0B4J264 116 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SMLR1H3BR10 107 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 OGG1O15527 345 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TNFSF12O43508 249 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CD3EP07766 207 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 DCTDP32321 178 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 KCNRGQ8N5I3 272 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 MOGAT1Q96PD6 335 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 AUNIPQ9H7T9 357 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 HIF1ANQ9NWT6 349 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 PILRAQ9UKJ1 303 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 UMAD1C9J7I0 102 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 PDCD6O75340 191 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NGFP01138 241 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 IGHA1P01876 353 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ZNF883P0CG24 379 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SULT1A3P0DMM9 295 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SULT1A4P0DMN0 295 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CTLA4P16410 223 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 RPS27P42677 84 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SPACA5Q96QH8 159 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 GSX2Q9BZM3 304 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SLIRPQ9GZT3 109 aaKnown RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 FBXO34Q9NWN3 711 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 DOCK4Q8N1I0 1966 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 MAGEB4O15481 346 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SSSCA1O60232 199 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SP1P08047 785 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 BMP5P22003 454 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 GABRA4P48169 554 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 UBE2G2P60604 165 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TIGITQ495A1 244 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 TCTE3Q8IZS6 198 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SFT2D1Q8WV19 159 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 MED30Q96HR3 178 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 ZNF416Q9BWM5 594 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 GNB4Q9HAV0 340 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 RAB18Q9NP72 206 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SMCO4Q9NRQ5 59 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 PSENENQ9NZ42 101 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 MTFP1Q9UDX5 166 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 KPTNQ9Y664 436 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 XKRY2A2RUG3 117 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 SHISA8B8ZZ34 492 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 M0QZ24 198 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CDC42EP2O14613 210 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CA11O75493 328 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CD1AP06126 327 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 HOXB1P14653 301 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-202ENST00000360093 GNB1P62873 340 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 FMODQ06828 376 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 CD226Q15762 336 aa4.32□□□□□ -1.72
SCN3A-202ENST00000360093 XAF1Q6GPH4 301 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms