RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 ANGPTL7O43827 346 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 TIMM8AO60220 97 aaPredicted RBP15.89■□□□□ 0.13
CLN3-206ENST00000360019 SLC22A6Q4U2R8 563 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 PYHIN1Q6K0P9 492 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 OR2W3Q7Z3T1 314 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 GDPD1Q8N9F7 314 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 RNF170Q96K19 258 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 HIST1H2AAQ96QV6 131 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 ATG5Q9H1Y0 275 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 NGBQ9NPG2 151 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 ABCB10Q9NRK6 738 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 RAB22AQ9UL26 194 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 FLNCQ14315 2725 aa15.89■□□□□ 0.13
CLN3-206ENST00000360019 IGKV1-12A0A0C4DH73 117 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 IGKV1D-12P01611 117 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 TMEM225BP0DP42 221 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 AGAP20933 346 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 NR4A2P43354 598 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 PTH2RP49190 550 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 PDZK1IP1Q13113 114 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 TMEM69Q5SWH9 247 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 OR10K1Q8NGX5 313 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 ADAT1Q9BUB4 502 aaKnown RBP15.88■□□□□ 0.13
CLN3-206ENST00000360019 MRPS7Q9Y2R9 242 aaKnown RBP15.88■□□□□ 0.13
CLN3-206ENST00000360019 ROS1P08922 2347 aa15.88■□□□□ 0.13
CLN3-206ENST00000360019 OR5B21A6NL26 309 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 H0YL77 283 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 CDC14BO60729 498 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 CLDN14O95500 239 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 MPIG6BO95866 241 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 HLA-DQB1P01920 261 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 RPS23P62266 143 aaKnown RBP15.87■□□□□ 0.13
CLN3-206ENST00000360019 NCMAPQ5T1S8 102 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 SLC22A25Q6T423 547 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 ASCL4Q6XD76 172 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 Q6ZR03 302 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 Q8N402 240 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 ZNF611Q8N823 705 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 KCNG3Q8TAE7 436 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 BANF2Q9H503 90 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 NPDC1Q9NQX5 325 aaPredicted RBP15.87■□□□□ 0.13
CLN3-206ENST00000360019 CA10Q9NS85 328 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 TMEM100Q9NV29 134 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 DUSP13Q9UII6 198 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 HCFC1P51610 2035 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 IGLV3-9A0A075B6K5 115 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 MLNRO43193 412 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 XRCC3O43542 346 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 IGHV3-13P01766 116 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 CSF3P09919 207 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 RANBP1P43487 201 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 HAAOP46952 286 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 TAS2R20P59543 309 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 GNG3P63215 75 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 MOGAT2Q3SYC2 334 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 STEAP3Q658P3 488 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 ADAM5Q6NVV9 412 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 BAIAP2L2Q6UXY1 529 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 WDR86Q86TI4 376 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 OR8H2Q8N162 312 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 ZNF808Q8N4W9 903 aaPredicted RBP15.87■□□□□ 0.13
CLN3-206ENST00000360019 OR8S1Q8NH09 359 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 S100A13Q99584 98 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 LPAR5Q9H1C0 372 aa15.87■□□□□ 0.13
CLN3-206ENST00000360019 ESRP2Q9H6T0 727 aaKnown RBP15.87■□□□□ 0.13
CLN3-206ENST00000360019 ELL3Q9HB65 397 aaPredicted RBP15.87■□□□□ 0.13
CLN3-206ENST00000360019 TUBAL3A6NHL2 446 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 CRTAPO75718 401 aaPredicted RBP15.86■□□□□ 0.13
CLN3-206ENST00000360019 IL7P13232 177 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 SERPINA2P20848 420 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 MNDAP41218 407 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 ZNF181Q2M3W8 571 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 SLC25A26Q70HW3 274 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 LYSMD2Q8IV50 215 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 ACBD4Q8NC06 268 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 PXT1Q8NFP0 134 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 GCDHQ92947 438 aaPredicted RBP15.86■□□□□ 0.13
CLN3-206ENST00000360019 PLPPR2Q96GM1 343 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 SYT3Q9BQG1 590 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 NICN1Q9BSH3 213 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 TMEM59Q9BXS4 323 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 MRPL37Q9BZE1 423 aaKnown RBP15.86■□□□□ 0.13
CLN3-206ENST00000360019 CST11Q9H112 138 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 MSL2Q9HCI7 577 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 MYO18BQ8IUG5 2567 aa15.86■□□□□ 0.13
CLN3-206ENST00000360019 CHD6Q8TD26 2715 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 A0A0A6YYD4 124 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.85■□□□□ 0.13
CLN3-206ENST00000360019 A0A1B0GWJ7 208 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 RAB27BO00194 218 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 KLF3P57682 345 aaPredicted RBP15.85■□□□□ 0.13
CLN3-206ENST00000360019 OR8G1Q15617 311 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 DMRTC2Q8IXT2 367 aaPredicted RBP15.85■□□□□ 0.13
CLN3-206ENST00000360019 MICU1Q9BPX6 476 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 RTL8AQ9BWD3 113 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 METTL9Q9H1A3 318 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 DIABLOQ9NR28 239 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 COL12A1Q99715 3063 aa15.85■□□□□ 0.13
CLN3-206ENST00000360019 ICE1Q9Y2F5 2266 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms