RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 H7BYZ3 331 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 SNCAP37840 140 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 PCK2Q16822 640 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 PRSS54Q6PEW0 395 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 PRSS41Q7RTY9 318 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 OR2L13Q8N349 312 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 UTP23Q9BRU9 249 aaKnown RBP14.37□□□□□ -0.11
NPHP3-201ENST00000337331 A0A087WUJ7 227 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 A0A1W2PPC4 97 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 OR6C6A6NF89 314 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 ADCYAP1P18509 176 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 S100A7P31151 101 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 EFNB2P52799 333 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 SMOC1Q9H4F8 434 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 B9D1Q9UPM9 204 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 OPRM1P35372 400 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TAS2R30P59541 319 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 SRPXP78539 464 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF74Q16587 644 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-201ENST00000337331 LANCL3Q6ZV70 420 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 GVQW1Q8N7I0 195 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 FBXO34Q9NWN3 711 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TRAV34A0A0B4J273 112 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 SERTM1A2A2V5 107 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 PPP1R14DQ9NXH3 145 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 GNG12Q9UBI6 72 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TRAV14DV4A0A0A6YYC5 116 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 CD46P15529 392 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TMEM33P57088 247 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TMEM128Q5BJH2 165 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TRIM61Q5EBN2 209 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF343Q6P1L6 599 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 OR10AD1Q8NGE0 317 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 OR51A4Q8NGJ6 313 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 NT5CQ8TCD5 201 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF814B7Z6K7 855 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 CLDN34H7C241 214 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 NKX2-2O95096 273 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 GABRA2P47869 451 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 DLK1P80370 383 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 RELQ04864 619 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-201ENST00000337331 CATR1Q13166 79 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF266Q14584 549 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 YRDCQ86U90 279 aaKnown RBP14.36□□□□□ -0.11
NPHP3-201ENST00000337331 DMRTC2Q8IXT2 367 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-201ENST00000337331 HLA-CQ95604 372 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 CMBLQ96DG6 245 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 MVB12AQ96EY5 273 aa14.36□□□□□ -0.11
NPHP3-201ENST00000337331 SIRT3Q9NTG7 399 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-201ENST00000337331 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
NPHP3-201ENST00000337331 A0A0B4J2E0 115 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 A0A0G2JK05 382 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 A0A1B0GX12 115 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 H3BQ15 152 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 ST8SIA3O43173 380 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 DUS4LO95620 317 aaKnown RBP14.35□□□□□ -0.11
NPHP3-201ENST00000337331 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 TNFRSF9Q07011 255 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 TESK1Q15569 626 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 IL22RA2Q969J5 263 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 EFSO43281 561 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 VAMP5O95183 116 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 GNB3P16520 340 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF133P52736 654 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-201ENST00000337331 SLC36A1Q7Z2H8 476 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 RFLNBQ8N5W9 214 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 OR4A4PQ8NGN8 299 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 ST8SIA1Q92185 356 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 CCDC74AQ96AQ1 378 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 NECAP2Q9NVZ3 263 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 STRAPQ9Y3F4 350 aaKnown RBP14.35□□□□□ -0.11
NPHP3-201ENST00000337331 NXPH3O95157 252 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 CLDN1O95832 211 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 HBE1P02100 147 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 KTI12Q96EK9 354 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-201ENST00000337331 S1PR5Q9H228 398 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 SPTBN2O15020 2390 aa14.35□□□□□ -0.11
NPHP3-201ENST00000337331 M0R135 149 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 C1QL1O75973 258 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 NAAAQ02083 359 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 LSRQ86X29 649 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OR13C8Q8NGS7 320 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OR51F2Q8NH61 342 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF799Q96GE5 643 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 SERTAD4Q9NUC0 356 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PITPNC1Q9UKF7 332 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 R4GMQ9 66 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 SPTY2D1-AS1A0A0U1RR47 76 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 M0QZK8 103 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 GGCTO75223 188 aaKnown RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PGA4P0DJD7 388 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PGA5P0DJD9 388 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 CYB561P49447 251 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF784Q8NCA9 323 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 M1APQ8TC57 530 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 MS4A10Q96PG2 267 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms