RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FABP6P51161 128 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 SKP2Q13309 424 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 MRPS24Q96EL2 167 aaKnown RBP15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 SLC35E1Q96K37 410 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 ADAM19Q9H013 955 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 DTYMKP23919 212 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 ACOT6Q3I5F7 207 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 NIT2Q9NQR4 276 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 NDRG3Q9UGV2 375 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
TRAPPC11-201ENST00000334690 SPINT1O43278 529 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 MBTPS2O43462 519 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 PDCD6O75340 191 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 MPZL1O95297 269 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 PDGFBP01127 241 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 RAB4AP20338 218 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 TMEM88Q6PEY1 159 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 PRSS42Q7Z5A4 293 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 ZNF321PQ8N8H1 164 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 FBLIM1Q8WUP2 373 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 GALMQ96C23 342 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 ARRDC1-AS1Q9H2J1 176 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 ZNF107Q9UII5 783 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 CACNA1IQ9P0X4 2223 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 CCDC88CQ9P219 2028 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 C20orf202A1L168 122 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 RNPS1Q15287 305 aaKnown RBP15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 ETFDHQ16134 617 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 MOB1BQ7L9L4 216 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 D2HGDHQ8N465 521 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 DEFB123Q8N688 67 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 OR11G2Q8NGC1 345 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 OR5M8Q8NGP6 311 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 PINX1Q96BK5 328 aaKnown RBP15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 SARGQ9BW04 601 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 RPH3ALQ9UNE2 315 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 S100A8P05109 93 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 LSM6P62312 80 aaKnown RBP15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 SP6Q3SY56 376 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 CLRN3Q8NCR9 226 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 NTNG2Q96CW9 530 aa15.21■□□□□ 0.03
TRAPPC11-201ENST00000334690 ATAD5Q96QE3 1844 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 CLEC18AA5D8T8 446 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 CDC14BO60729 498 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 SULT1A3P0DMM9 295 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 SULT1A4P0DMN0 295 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 IAPPP10997 89 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 PEBP1P30086 187 aaKnown RBP15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 GPM6AP51674 278 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 IFITM3Q01628 133 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR1C1Q15619 314 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 CLEC18CQ8NCF0 446 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 CMTM2Q8TAZ6 248 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 ASB10Q8WXI3 467 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF75AQ96N20 296 aa15.21■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF638Q14966 1978 aaKnown RBP15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 C1QCP02747 245 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 FABP1P07148 127 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 RAC3P60763 192 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 PJVKQ0ZLH3 352 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 RXFP4Q8TDU9 374 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 RCL1Q9Y2P8 373 aaKnown RBP15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 TRGV5A0A0B4J1U4 118 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 HRKO00198 91 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 GABRA4P48169 554 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 AGFG1P52594 562 aaKnown RBP15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 WDR74Q6RFH5 385 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF561Q8N587 486 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 PPP1R3EQ9H7J1 279 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 LIPT2A6NK58 231 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR2A2Q6IF42 318 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF774Q6NX45 483 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 PRSS54Q6PEW0 395 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 SSX9Q7RTT3 188 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 DEFB108BQ8NET1 73 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 SMIM7Q9BQ49 75 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 IER2Q9BTL4 223 aa15.2■□□□□ 0.02
TRAPPC11-201ENST00000334690 COL11A1P12107 1806 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 TCRBV16S1A1N1A0A5B0 115 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 RNASEK-C17orf49H0YIS7 233 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 GCM2O75603 506 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 CST7O76096 145 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 TAS2R45P59539 299 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 SURF2Q15527 256 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 LRRTM1Q86UE6 522 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 ADGRG3Q86Y34 549 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 SLC39A7Q92504 469 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 RASL10BQ96S79 203 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 PTP4A3O75365 173 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 INHBBP09529 407 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 ACAA2P42765 397 aaKnown RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 LGALS4P56470 323 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 RTL8BQ17RB0 113 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 NHLRC1Q6VVB1 395 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 C2CD4CQ8TF44 421 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 TAAR6Q96RI8 345 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms