RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 AGFG1P52594 562 aaKnown RBP15.31■□□□□ 0.04
GABRB3-202ENST00000311550 RAB35Q15286 201 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 TSEN54Q7Z6J9 526 aaKnown RBP15.31■□□□□ 0.04
GABRB3-202ENST00000311550 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
GABRB3-202ENST00000311550 TRIB1Q96RU8 372 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 OPA3Q9H6K4 179 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 LTBP1Q14766 1721 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 DUS4LO95620 317 aaKnown RBP15.31■□□□□ 0.04
GABRB3-202ENST00000311550 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
GABRB3-202ENST00000311550 CATSPERDQ86XM0 798 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
GABRB3-202ENST00000311550 MRGPREQ86SM8 312 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 CHST6Q9GZX3 395 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 RAB18Q9NP72 206 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 MED9Q9NWA0 146 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 IGF2P01344 180 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 DRAM2Q6UX65 266 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 LSRQ86X29 649 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-202ENST00000311550 FAM219AQ8IW50 185 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 ZNF485Q8NCK3 441 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 H1FXQ92522 213 aaKnown RBP15.3■□□□□ 0.04
GABRB3-202ENST00000311550 BGLAPP02818 100 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 ARL3P36405 182 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 NAA40Q86UY6 237 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 C9orf40Q8IXQ3 194 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 SLC35G3Q8N808 338 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 MIDNQ504T8 468 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 SLC38A6Q8IZM9 456 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 OR4D10Q8NGI6 311 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 AP1S3Q96PC3 154 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 SPINK2P20155 84 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 C1orf87Q8N0U7 546 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 LHX4Q969G2 390 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 TM4SF19Q96DZ7 209 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 KCNE5Q9UJ90 142 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 RP1P56715 2156 aa15.3■□□□□ 0.04
GABRB3-202ENST00000311550 ISXQ2M1V0 245 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 Q7L0L9 218 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 RPUSD4Q96CM3 377 aaKnown RBP15.29■□□□□ 0.04
GABRB3-202ENST00000311550 PCED1AQ9H1Q7 454 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 GABRA1P14867 456 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 FABP6P51161 128 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 RAB1AP62820 205 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 DEFB108BQ8NET1 73 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 PSENENQ9NZ42 101 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 PLXNA1Q9UIW2 1896 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 A0A1W2PQD3 144 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 LIPT2A6NK58 231 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 GP1BAP07359 652 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 CCL2P13500 99 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 ACKR3P25106 362 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 CLEC12BQ2HXU8 276 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 TMEM41BQ5BJD5 291 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 ARRDC1-AS1Q9H2J1 176 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 ZNF727A8MUV8 499 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 IGHV4-34P06331 123 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 RRASP10301 218 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 GALNSP34059 522 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 RAB39BQ96DA2 213 aa15.29■□□□□ 0.04
GABRB3-202ENST00000311550 BRCA1P38398 1863 aaKnown RBP15.28■□□□□ 0.04
GABRB3-202ENST00000311550 ZNF787Q6DD87 383 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 C4orf17Q53FE4 359 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 PILRAQ9UKJ1 303 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 RASL10BQ96S79 203 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 ESRP2Q9H6T0 727 aaKnown RBP15.28■□□□□ 0.04
GABRB3-202ENST00000311550 MEX3AA1L020 520 aaKnown RBP15.28■□□□□ 0.04
GABRB3-202ENST00000311550 TNFSF15O95150 251 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 CST4P01036 141 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 GGNBP1Q5YKI7 109 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 MRPL22Q9NWU5 206 aaKnown RBP15.28■□□□□ 0.04
GABRB3-202ENST00000311550 SF3B6Q9Y3B4 125 aaKnown RBP15.28■□□□□ 0.04
GABRB3-202ENST00000311550 ALPK2Q86TB3 2170 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 C7orf66A4D0T2 115 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 CYB5BO43169 146 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 ZNF205O95201 554 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 CLEC9AQ6UXN8 241 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 OSGIN2Q9Y236 505 aa15.28■□□□□ 0.04
GABRB3-202ENST00000311550 GPR31O00270 319 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 SLC22A18ASQ8N1D0 253 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 OR4F5Q8NH21 305 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 APOBEC3DQ96AK3 386 aaPredicted RBP15.27■□□□□ 0.04
GABRB3-202ENST00000311550 OR4F4Q96R69 305 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 C12orf57Q99622 126 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 TET1Q8NFU7 2136 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 MBTPS2O43462 519 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 RD3LP0DJH9 198 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 RPS4XP62701 263 aaKnown RBP15.27■□□□□ 0.04
GABRB3-202ENST00000311550 PABPC1L2AQ5JQF8 200 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.04
GABRB3-202ENST00000311550 P4HTMQ9NXG6 502 aa15.27■□□□□ 0.04
GABRB3-202ENST00000311550 H7BYZ3 331 aa15.27■□□□□ 0.03
GABRB3-202ENST00000311550 SCGB2A1O75556 95 aa15.27■□□□□ 0.03
GABRB3-202ENST00000311550 KIR3DL2P43630 455 aa15.27■□□□□ 0.03
GABRB3-202ENST00000311550 PJVKQ0ZLH3 352 aa15.27■□□□□ 0.03
GABRB3-202ENST00000311550 UQCC3Q6UW78 93 aa15.27■□□□□ 0.03
GABRB3-202ENST00000311550 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.27■□□□□ 0.03
GABRB3-202ENST00000311550 NANPQ8TBE9 248 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms