RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TBPP20226 339 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 GSK3AP49840 483 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 B3GALT5-AS1P59052 145 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 FXYD4P59646 89 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 SCRN3Q0VDG4 424 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 BTN1A1Q13410 526 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 OR52H1Q8NGJ2 320 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 PRRG4Q9BZD6 226 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 CALHM2Q9HA72 323 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 SH2D2AQ9NP31 389 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 TMEM38BQ9NVV0 291 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 GPR160Q9UJ42 338 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 MCTS1Q9ULC4 181 aaKnown RBP10.08□□□□□ -0.8
PTPN2-201ENST00000309660 AUP1Q9Y679 476 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 RNF222A6NCQ9 220 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 SHOXO15266 292 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 CD8AP01732 235 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 APOC3P02656 99 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 PSMB6P28072 239 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 PSG4Q00888 419 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 RIPPLY1Q0D2K3 151 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 FAM189A2Q15884 450 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 ARRDC1Q8N5I2 433 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 OR1S1Q8NH92 325 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 TAS2R3Q9NYW6 316 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 FOXJ2Q9P0K8 574 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 PCDHGA1Q9Y5H4 931 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
PTPN2-201ENST00000309660 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF850A8MQ14 1090 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 TAS2R31P59538 309 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 RAB35Q15286 201 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 ABHD17BQ5VST6 288 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 JMJD6Q6NYC1 403 aaPredicted RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 MOB3CQ70IA8 216 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 ZC3H10Q96K80 434 aaKnown RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF2Q9BSG1 426 aaPredicted RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 MYOZ1Q9NP98 299 aaPredicted RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 FBLN5Q9UBX5 448 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 GPR132Q9UNW8 380 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 DHRS7CA6NNS2 312 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 IL2RAP01589 272 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 AKR1C2P52895 323 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 C3AR1Q16581 482 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 PIGYQ3MUY2 71 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 DRAM2Q6UX65 266 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 KCNRGQ8N5I3 272 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 OR51B6Q9H340 312 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 NOSIPQ9Y314 301 aaKnown RBP10.07□□□□□ -0.8
PTPN2-201ENST00000309660 V9GYS6 101 aa10.07□□□□□ -0.8
PTPN2-201ENST00000309660 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 MFSD2BA6NFX1 497 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF716A6NP11 495 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SNAPC5O75971 98 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SERPINA7P05543 415 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 CTSSP25774 331 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 UBA52P62987 128 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SSPNQ14714 243 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 PNLIPRP3Q17RR3 467 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 ANKRD55Q3KP44 614 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 TSPO2Q5TGU0 170 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 CDCP2Q5VXM1 449 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SKA3Q8IX90 412 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 PXT1Q8NFP0 134 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 KCNE4Q8WWG9 221 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SIGLEC12Q96PQ1 595 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 DHRS9Q9BPW9 319 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 METTL9Q9H1A3 318 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 MED13Q9UHV7 2174 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 BCL2L11O43521 198 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 OR2F2O95006 317 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 NRASP01111 189 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 IGHEP01854 428 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 CRHP06850 196 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 TAS2R46P59540 309 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF92Q03936 586 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 OR2F1Q13607 317 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 ACTBL2Q562R1 376 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 CRIP3Q6Q6R5 217 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 STPG2Q8N412 459 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 OR5AP2Q8NGF4 316 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 INTS12Q96CB8 462 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 CMSS1Q9BQ75 279 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 REG4Q9BYZ8 158 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 NUP50Q9UKX7 468 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 B4E171 279 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 GEMIN2O14893 280 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SYNGR3O43761 229 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 FARS2O95363 451 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms