RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ZNF355PQ9NSJ1 428 aa14.55□□□□□ -0.08
BRD3-201ENST00000303407 MT-ND4LP03901 98 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 SRD5A2P31213 254 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 HLXQ14774 488 aaPredicted RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 SP6Q3SY56 376 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 C9orf40Q8IXQ3 194 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 C2CD4CQ8TF44 421 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 RASL10BQ96S79 203 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 SMOC1Q9H4F8 434 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 MRPS18AQ9NVS2 196 aaKnown RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 PPP1R14DQ9NXH3 145 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 ABCD4O14678 606 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 DEFA4P12838 97 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 S100A7P31151 101 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 LIMK1P53667 647 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 RGS7BPQ6MZT1 257 aaPredicted RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 GVQW1Q8N7I0 195 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 FIGNL2A6NMB9 653 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 RPS2P15880 293 aaKnown RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 ACAA2P42765 397 aaKnown RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 ZNF816Q0VGE8 651 aaPredicted RBP14.54□□□□□ -0.08
BRD3-201ENST00000303407 PRDX4Q13162 271 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 DHRS13Q6UX07 377 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 TMEM91Q6ZNR0 172 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 GALMQ96C23 342 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 RAB18Q9NP72 206 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 ZFP64Q9NPA5 681 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 SELENOPP49908 381 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 HES1Q14469 280 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 RTL8BQ17RB0 113 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 SMIM21Q3B7S5 101 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 OR10X1Q8NGY0 326 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 HGDQ93099 445 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 OSGIN2Q9Y236 505 aa14.54□□□□□ -0.08
BRD3-201ENST00000303407 ACKR3P25106 362 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 SLC22A18ASQ8N1D0 253 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 OR11G2Q8NGC1 345 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 ZNF721Q8TF20 911 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 BTF3L4Q96K17 158 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 SHARPINQ9H0F6 387 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 GCM2O75603 506 aaPredicted RBP14.53□□□□□ -0.08
BRD3-201ENST00000303407 ZNF787Q6DD87 383 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 CT55Q8WUE5 264 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 A0A1W2PR80 420 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 TCRBV16S1A1N1A0A5B0 115 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 CXorf67Q86X51 503 aaPredicted RBP14.53□□□□□ -0.08
BRD3-201ENST00000303407 LHX9Q9NQ69 397 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 LOC285556D6RIA3 1793 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 GNB1P62873 340 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 ZNF79Q15937 498 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 TSEN54Q7Z6J9 526 aaKnown RBP14.53□□□□□ -0.08
BRD3-201ENST00000303407 FN3KRPQ9HA64 309 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 PTPRFP10586 1907 aa14.53□□□□□ -0.08
BRD3-201ENST00000303407 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
BRD3-201ENST00000303407 PTP4A3O75365 173 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 PATE4P0C8F1 98 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 CD37P11049 281 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 ZNF770Q6IQ21 691 aaPredicted RBP14.52□□□□□ -0.08
BRD3-201ENST00000303407 SUB1P53999 127 aaKnown RBP eCLIP14.52□□□□□ -0.08
BRD3-201ENST00000303407 GNG3P63215 75 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 EIF3IQ13347 325 aaKnown RBP14.52□□□□□ -0.08
BRD3-201ENST00000303407 ADAM5Q6NVV9 412 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 OR4F5Q8NH21 305 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 ERGIC1Q969X5 290 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 OR4F4Q96R69 305 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 LSM2Q9Y333 95 aaKnown RBP14.52□□□□□ -0.08
BRD3-201ENST00000303407 IGHV5-10-1A0A0J9YXX1 117 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 F6UZH7 168 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 CCL2P13500 99 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 FUT5Q11128 374 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 MPPED2Q15777 294 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 OR2T2Q6IF00 324 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 ZPLD1Q8TCW7 415 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 SLC35E1Q96K37 410 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 PRSS27Q9BQR3 290 aa14.52□□□□□ -0.08
BRD3-201ENST00000303407 ACTR3CQ9C0K3 210 aaPredicted RBP14.52□□□□□ -0.08
BRD3-201ENST00000303407 LTBP1Q14766 1721 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 ZP3P21754 424 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 KIAA0141Q14154 515 aaPredicted RBP14.52□□□□□ -0.09
BRD3-201ENST00000303407 ISXQ2M1V0 245 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 PECRQ9BY49 303 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 PATZ1Q9HBE1 687 aaKnown RBP14.52□□□□□ -0.09
BRD3-201ENST00000303407 ST6GALNAC2Q9UJ37 374 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 ONECUT2O95948 504 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 CA6P23280 308 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 ZNF239Q16600 458 aaKnown RBP14.52□□□□□ -0.09
BRD3-201ENST00000303407 SARGQ9BW04 601 aa14.52□□□□□ -0.09
BRD3-201ENST00000303407 TMEM41BQ5BJD5 291 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 TMEM30CPA0ZSE6 113 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 CNIH1O95406 144 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 LGALS4P56470 323 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 SPINK14Q6IE38 97 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 MRPS24Q96EL2 167 aaKnown RBP14.51□□□□□ -0.09
BRD3-201ENST00000303407 RHOFQ9HBH0 211 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 GP1BAP07359 652 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 ACOT6Q3I5F7 207 aaPredicted RBP14.51□□□□□ -0.09
BRD3-201ENST00000303407 B3GNTL1Q67FW5 361 aaPredicted RBP14.51□□□□□ -0.09
BRD3-201ENST00000303407 LRRTM1Q86UE6 522 aa14.51□□□□□ -0.09
BRD3-201ENST00000303407 RXFP4Q8TDU9 374 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms