RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF726A6NNF4 738 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 DEDDO75618 318 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 ISG15P05161 165 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 HPNP05981 417 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 PIGPP57054 158 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 DEFB119Q8N690 84 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 CA5BP1Q8WTZ4 195 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 TREM2Q9NZC2 230 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF319Q9P2F9 582 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 SCGNO76038 276 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 CLPSP04118 112 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 HSF1Q00613 529 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 PDCD1Q15116 288 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 RHEBQ15382 184 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 FBXW12Q6X9E4 464 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 OR8B12Q8NGG6 310 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 GNRHR2Q96P88 292 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 STARD10Q9Y365 291 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 NUP210LQ5VU65 1888 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 C5orf63A6NC05 138 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 DHRS7CA6NNS2 312 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 MPZP25189 248 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 TAS2R46P59540 309 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 MFAP5Q13361 173 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 OR5AS1Q8N127 324 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 TMEM217Q8N7C4 229 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 STT3BQ8TCJ2 826 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 RNF133Q8WVZ7 376 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 SLC46A1Q96NT5 459 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 PADI1Q9ULC6 663 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 ZDHHC8Q9ULC8 765 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 OSGIN2Q9Y236 505 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 IFITM10A6NMD0 228 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 FKTNO75072 461 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 TRGC2P03986 189 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 HEXBP07686 556 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 FCGR2AP12318 317 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 MMP16P51512 607 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 HSD17B7P56937 341 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 CLRN1P58418 232 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 TLE1Q04724 770 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF239Q16600 458 aaKnown RBP12.92□□□□□ -0.34
COL6A2-201ENST00000300527 DMRTC2Q8IXT2 367 aaPredicted RBP12.92□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF610Q8N9Z0 462 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 FGF14Q92915 247 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 MAGT1Q9H0U3 335 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 CHD9Q3L8U1 2897 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 CXCL1P09341 107 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 NDUFB7P17568 137 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 AKT2P31751 481 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 OR2G3Q8NGZ4 309 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 TAAR9Q96RI9 348 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 POMT1Q9Y6A1 747 aa12.92□□□□□ -0.34
COL6A2-201ENST00000300527 H3BQ15 152 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 ANGPTL7O43827 346 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 ONECUT2O95948 504 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 RPS2P15880 293 aaKnown RBP12.91□□□□□ -0.34
COL6A2-201ENST00000300527 AFF3P51826 1226 aaKnown RBP12.91□□□□□ -0.34
COL6A2-201ENST00000300527 STARD6P59095 220 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 OR2T2Q6IF00 324 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 PGAM5Q96HS1 289 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 VN1R1Q9GZP7 353 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 MS4A18H0YCH9 400 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 DANCRP0C864 163 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 HOXA5P20719 270 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-201ENST00000300527 FAM3AP98173 230 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 MS4A18Q3C1V0 323 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 ASB10Q8WXI3 467 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-201ENST00000300527 SMOC1Q9H4F8 434 aa12.91□□□□□ -0.34
COL6A2-201ENST00000300527 FAM24AA6NFZ4 105 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 FAHP16930 419 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 FCARP24071 287 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 CDX1P47902 265 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-201ENST00000300527 PCK2Q16822 640 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 OR52M1Q8NGK5 317 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 A6NIZ1 184 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 CCDC85CA6NKD9 419 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 PHOX2AO14813 284 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 LYL1P12980 280 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 THBS4P35443 961 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 RAP1BP61224 184 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 TAF9Q16594 264 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms