RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 MZB1Q8WU39 189 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 RAB1CQ92928 201 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 HTN1P15515 57 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 RPL7P18124 248 aaKnown RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 RND1Q92730 232 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 DDX60LQ5H9U9 1706 aaKnown RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 F2RL2O00254 374 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 IGLV3-25P01717 112 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 OR4A8P0C604 315 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 ANKRD34CP0C6C1 535 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 KRTDAPP60985 99 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 OXA1LQ15070 435 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 C3AR1Q16581 482 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 CD1EP15812 388 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 CEACAM3P40198 252 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 LYZP61626 148 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 MCHR2Q969V1 340 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-201ENST00000225964 RAB7AP51149 207 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 TUSC1Q2TAM9 212 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 MRGPREQ86SM8 312 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 SERGEFQ9UGK8 458 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 LIMS3P0CW19 117 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 LIMS4P0CW20 117 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-201ENST00000225964 FUT3P21217 361 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 LGALS7P47929 136 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 FMODQ06828 376 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 TNXAQ16473 311 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 PABPC1L2AQ5JQF8 200 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 RFESDQ8TAC1 157 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 ADAM20O43506 726 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 GALNSP34059 522 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 DDOSTP39656 456 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 LPAR6P43657 344 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 GPNMBQ14956 572 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF528Q3MIS6 628 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 FNDC7Q5VTL7 733 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 AMDHD2Q9Y303 409 aa11.84□□□□□ -0.51
COL1A1-201ENST00000225964 CELA2BP08218 269 aaPredicted RBP11.83□□□□□ -0.51
COL1A1-201ENST00000225964 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.51
COL1A1-201ENST00000225964 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF793Q6ZN11 406 aa11.83□□□□□ -0.51
COL1A1-201ENST00000225964 CALHM3Q86XJ0 350 aa11.83□□□□□ -0.51
COL1A1-201ENST00000225964 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.51
COL1A1-201ENST00000225964 KCNMB2Q9Y691 235 aa11.83□□□□□ -0.51
COL1A1-201ENST00000225964 J3KRW8 73 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 CPN1P15169 458 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 PP6455Q8WZ26 134 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 IGHV1OR21-1A0A087WYE8 117 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 hADV38S2A0JD32 116 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 AGFG2O95081 481 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 ISL1P61371 349 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 PAX5Q02548 391 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 GAMTQ14353 236 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 OTOSQ8NHW6 89 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 UCK1Q9HA47 277 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 FKBP11Q9NYL4 201 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 CST7O76096 145 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 ZNF32P17041 273 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 COL9A1P20849 921 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 DCTDP32321 178 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 TGFBR1P36897 503 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 MDH2P40926 338 aaKnown RBP11.83□□□□□ -0.52
COL1A1-201ENST00000225964 SLC25A35Q3KQZ1 300 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 TRAT1Q6PIZ9 186 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 MYPOPQ86VE0 399 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-201ENST00000225964 OR1B1Q8NGR6 318 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 LILRB1Q8NHL6 650 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-201ENST00000225964 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 OR5V1Q9UGF6 321 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 PCDHGA9Q9Y5G4 932 aaKnown RBP11.83□□□□□ -0.52
COL1A1-201ENST00000225964 TRBV5-4A0A0C4DH59 114 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 S100A8P05109 93 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 EPHA8P29322 1005 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-201ENST00000225964 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 CABLES2Q9BTV7 478 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 ZDHHC11Q9H8X9 412 aa11.83□□□□□ -0.52
COL1A1-201ENST00000225964 EDIL3O43854 480 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 DYNLRB2Q8TF09 96 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 C20orf141Q9NUB4 165 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 IL36GQ9NZH8 169 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TJP1Q07157 1748 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TFAP2AP05549 437 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 OR5R1Q8NH85 324 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms