RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-255	ENST00000641733	GNRHR	P30968	328 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	RPA3	P35244	121 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	KLK7	P49862	253 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	FABP6	P51161	128 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	LINC01547	P58512	204 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	RHOA	P61586	193 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	REEP5	Q00765	189 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	TGFBR3	Q03167	851 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ACVR1	Q04771	509 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	PRKCD	Q05655	676 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	KDSR	Q06136	332 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF726P1	Q15940	193 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	LRRC36	Q1X8D7	754 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	PIGG	Q5H8A4	983 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	C9orf66	Q5T8R8	295 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	NPSR1	Q6W5P4	371 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	TMEM25	Q86YD3	366 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF689	Q96CS4	500 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC25A38	Q96DW6	304 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF681	Q96N22	645 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	PLGRKT	Q9HBL7	147 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	AP3M1	Q9Y2T2	418 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	PHF3	Q92576	2039 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	LOC400499	M0QZD8	3231 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	IGHV7-81	A0A0B4J1V7	117 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733		A0A0G2JLM5	398 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RPL37AP8	A6NKH3	93 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	C12orf77	C9JDV5	145 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733		M0R036	132 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	HCRTR1	O43613	425 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	OR5AL1	P0C617	328 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	OR8U8	P0C7N1	319 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	THBS3	P49746	956 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RAP1GDS1	P52306	607 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	VSX2	P58304	361 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	ERVPABLB-1	P60509	514 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	SNAP25	P60880	206 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	NUTF2	P61970	127 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RPL10A	P62906	217 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	CD47	Q08722	323 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	ASAH1	Q13510	395 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RAB31	Q13636	194 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	PRPSAP1	Q14558	356 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	SLC1A5	Q15758	541 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	PDZD11	Q5EBL8	140 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	FAM27D1	Q5T7N8	215 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	C1orf146	Q5VVC0	180 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	HBM	Q6B0K9	141 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	TTC33	Q6PID6	262 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	C17orf82	Q86X59	251 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	CDC20B	Q86Y33	519 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	CYP4Z2P	Q8N1L4	340 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	PNKD	Q8N490	385 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	TMEM251	Q8N6I4	163 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	OR8G5	Q8NG78	346 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	OR51S1	Q8NGJ8	323 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	LMO3	Q8TAP4	145 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	ZFP90	Q8TF47	636 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RASL10A	Q92737	203 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	C9orf16	Q9BUW7	83 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RNF126	Q9BV68	326 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	ASB8	Q9H765	288 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	ZDHHC4	Q9NPG8	344 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	FGFR1OP2	Q9NVK5	253 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	NLE1	Q9NVX2	485 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	C3orf18	Q9UK00	162 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	USH1C	Q9Y6N9	552 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	RALGAPA1	Q6GYQ0	2036 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	DSP	P15924	2871 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	LCT	P09848	1927 aa		4.83	□□□□□ -1.64
CASC19-255	ENST00000641733	NBEA	Q8NFP9	2946 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	IGKV2D-30	A0A075B6S6	120 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	TRAV39	A0A0B4J263	110 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	IGHV3-16	A0A0C4DH30	117 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733		A0A0G2JRQ6	117 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	SYCE1L	A8MT33	242 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733		A8MXK9	166 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	LRRN3	E7EW58	273 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	SLC31A1	O15431	190 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	IDH3B	O43837	385 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	LMX1B	O60663	402 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	SRP72	O76094	671 aa	Known RBP	4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	SNAPIN	O95295	136 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	RET	P07949	1114 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	PVALB	P20472	110 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	USF1	P22415	310 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	MYL9	P24844	172 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	FMO3	P31513	532 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	VDAC2	P45880	294 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	GDI2	P50395	445 aa	Known RBP	4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	BNIP2	Q12982	314 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	QPRT	Q15274	297 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	ZNF876P	Q49A33	203 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	DNAL1	Q4LDG9	190 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	PAGE3	Q5JUK9	113 aa		4.82	□□□□□ -1.64
CASC19-255	ENST00000641733	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms