RNA–Protein interactions for RNA: ENST00000609969.1

AC063944.3-201, humanhuman

BASIC

Gene AC063944.3, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC063944.3-201ENST00000609969 CXCR1P25024 350 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 TEAD1P28347 426 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ACTR1AP61163 376 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 TRDNQ13061 729 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 PRDX4Q13162 271 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ENDOGQ14249 297 aaKnown RBP0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 FAM57AQ8TBR7 257 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ELMO1Q92556 727 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 PRRC1Q96M27 445 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 CRACR2AQ9BSW2 395 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 TTTY12Q9BZ98 90 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ZYG11BQ9C0D3 744 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ACTR3CQ9C0K3 210 aaPredicted RBP0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ACP6Q9NPH0 428 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 ELP1O95163 1332 aa0.82□□□□□ -2.28
AC063944.3-201ENST00000609969 SEC11BP0C7V7 166 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 GABRG2P18507 467 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 TUFMP49411 452 aaKnown RBP0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 ZMYND11Q15326 602 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 SPESP1Q6UW49 350 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 BPIFB6Q8NFQ5 453 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 OR10D4PQ8NGN7 298 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 OR4K13Q8NH42 304 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 SMARCD1Q96GM5 515 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 RDH12Q96NR8 316 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 TMEM38BQ9NVV0 291 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 JCADQ9P266 1359 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 CR1P17927 2039 aa0.81□□□□□ -2.28
AC063944.3-201ENST00000609969 IGKV1D-43A0A0B4J1Z2 117 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 TRBV11-1A0A0K0K1C0 115 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 LY6LH3BQJ8 138 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 CD160O95971 181 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 ZNF140P52738 457 aaPredicted RBP0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 RPS15AP62244 130 aaKnown RBP0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 OR1Q1Q15612 314 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 N4BP2L1Q5TBK1 243 aaPredicted RBP0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 FAM19A4Q96LR4 140 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 GPR21Q99679 349 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 CALN1Q9BXU9 219 aa0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 MRPL16Q9NX20 251 aaKnown RBP0.8□□□□□ -2.28
AC063944.3-201ENST00000609969 SMCO3A2RU48 225 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 ERI3O43414 337 aaKnown RBP0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 CTNSO60931 367 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 TRGV3P03979 118 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 GRB2P62993 217 aaKnown RBP0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 INCA1Q0VD86 236 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 STEAP4Q687X5 459 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 TEX9Q8N6V9 391 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 OR8K1Q8NGG5 319 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 ISG20Q96AZ6 181 aaKnown RBP0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 FXYD5Q96DB9 178 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 BEX1Q9HBH7 125 aa0.79□□□□□ -2.28
AC063944.3-201ENST00000609969 A0A0B4J2C4 111 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 ZNF729A6NN14 1252 aaPredicted RBP0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 EIF3HO15372 352 aaKnown RBP eCLIP0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 HUS1O60921 280 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 CXorf1O96002 111 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 MYL2P10916 166 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 PTHLHP12272 177 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 RAB5AP20339 215 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 BCKDHBP21953 392 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 SLC6A1P30531 599 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 MRPL19P49406 292 aaKnown RBP0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 ZNF33AQ06730 810 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 HSDL1Q3SXM5 330 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 LINC00303Q3SY05 128 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 WDR82Q6UXN9 313 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 DYNLL2Q96FJ2 89 aa0.78□□□□□ -2.28
AC063944.3-201ENST00000609969 GMNCA6NCL1 334 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 ZNF860A6NHJ4 632 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 FFAR1O14842 300 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 SLC19A2O60779 497 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 OXTP01178 125 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 NUDT2P50583 147 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 FOXF1Q12946 379 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 SS18Q15532 418 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 ITPRIPQ8IWB1 547 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 WDR31Q8NA23 367 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 OR1S1Q8NH92 325 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 APOBEC3DQ96AK3 386 aaPredicted RBP0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 Q96MT0 163 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 XPO6Q96QU8 1125 aaKnown RBP0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 ABCB9Q9NP78 766 aa0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 ZNF608Q9ULD9 1512 aaPredicted RBP0.77□□□□□ -2.29
AC063944.3-201ENST00000609969 TSPAN11A1L157 253 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 CGB3P0DN86 165 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 GNRHRP30968 328 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 SERPINB8P50452 374 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 OR2B8PP59922 312 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 PRB3Q04118 309 aaPredicted RBP0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 CASC1Q6TDU7 716 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 ZDHHC22Q8N966 263 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 TTC29Q8NA56 475 aaPredicted RBP0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 SLC38A4Q969I6 547 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 ZNF625Q96I27 306 aaPredicted RBP0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 RNF170Q96K19 258 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 PPP1R36Q96LQ0 422 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 KIR3DX1Q9H7L2 352 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 PITPNC1Q9UKF7 332 aa0.76□□□□□ -2.29
AC063944.3-201ENST00000609969 RCL1Q9Y2P8 373 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms