RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ARL2BPQ9Y2Y0 163 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 LRP12Q9Y561 859 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 MAB21L2Q9Y586 359 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A1B0GW55 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 ARRDC5A6NEK1 342 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 OR2AT4A6NND4 320 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 PRODHO43272 600 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L2P0CJ85 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L3P0CJ86 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L4P0CJ87 422 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L5P0CJ88 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L6P0CJ89 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L7P0CJ90 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 NDUFB7P17568 137 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 GLRA1P23415 457 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 GNG3P63215 75 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 EGR3Q06889 387 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 GFOD2Q3B7J2 385 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4L9Q6RFH8 374 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 CYP2R1Q6VVX0 501 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DHFR2Q86XF0 187 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 OR5A2Q8NGI9 324 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 FAM110DQ8TAY7 271 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 THEM6Q8WUY1 208 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 RPL3LQ92901 407 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUS3LQ96G46 650 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 GAFA1Q96PS6 74 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 TEX12Q9BXU0 123 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 FAM107BQ9H098 131 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 HEXA-AS1Q9H8Q6 139 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 BRD7Q9NPI1 651 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 DUX4Q9UBX2 424 aa14.57□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A0U1RQV5 110 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OR5B21A6NL26 309 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 PRR23D1E9PI22 279 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 H0YAE9 185 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 H3BN98 237 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 SOX14O95416 240 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 PRR23D2P0DMB1 279 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 DCTDP32321 178 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 TRIM25Q14258 630 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 DGUOKQ16854 277 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 CEACAM21Q3KPI0 293 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 SLC35D3Q5M8T2 416 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 ZBTB37Q5TC79 503 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 LCN8Q6JVE9 175 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 KCTD18Q6PI47 426 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 FGFRL1Q8N441 504 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OR10G2Q8NGC3 310 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OR51G2Q8NGK0 314 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OR4C13Q8NGP0 309 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OTULINQ96BN8 352 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 SEH1LQ96EE3 360 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 SDSLQ96GA7 329 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 WDR13Q9H1Z4 485 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 OR51V1Q9H2C8 321 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 PPA2Q9H2U2 334 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 SNTG1Q9NSN8 517 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 U3KQV3 271 aa14.56□□□□□ -0.08
SHKBP1-227ENST00000602011 TCRBV5S2A0A599 114 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 FAM183AA6NL82 134 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 AKR7A2O43488 359 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 ACKR3P25106 362 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 GABRA2P47869 451 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 PSMA6P60900 246 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 FBLN7Q53RD9 439 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 LCN1P1Q5VSP4 162 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 HIST2H2BDQ6DRA6 164 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 REC114Q7Z4M0 266 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 OR5K1Q8NHB7 308 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 OR2T6Q8NHC8 308 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 FAM81AQ8TBF8 368 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 GIPC3Q8TF64 312 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 FEVQ99581 238 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 SSX3Q99909 188 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 CDCA4Q9BXL8 241 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 SEMA6AQ9H2E6 1030 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 OR51I2Q9H344 312 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 ARL8BQ9NVJ2 186 aa14.55□□□□□ -0.08
SHKBP1-227ENST00000602011 OPN1MWP04001 364 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 OPN1MW2P0DN77 364 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 OPN1MW3P0DN78 364 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 RAP2AP10114 183 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 ELF3P78545 371 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 LRRC75BQ2VPJ9 315 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 PIGWQ7Z7B1 504 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 CALHM1Q8IU99 346 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 AMELYQ99218 206 aa14.54□□□□□ -0.08
SHKBP1-227ENST00000602011 H3BUX3 64 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 GSC2O15499 205 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF254O75437 659 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 PSG2P11465 335 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ALOX5APP20292 161 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ATP6V1B2P21281 511 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 EFNB2P52799 333 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 RIPPLY1Q0D2K3 151 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 PPP1R8Q12972 351 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 THAP5Q7Z6K1 395 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 KRT77Q7Z794 578 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 HPSE2Q8WWQ2 592 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms