RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 SLC35A2P78381 396 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 SLC3A1Q07837 685 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 CDK5R1Q15078 307 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 CEACAM21Q3KPI0 293 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 CLVS2Q5SYC1 327 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 TMEM42Q69YG0 159 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 SFRP4Q6FHJ7 346 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-203ENST00000585894 KRT74Q7RTS7 529 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 BIVMQ86UB2 503 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 OR13C3Q8NGS6 347 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 OR13C5Q8NGS8 318 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 OR11L1Q8NGX0 322 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 OR5AK2Q8NH90 309 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 Q8TCH9 128 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 FGGYQ96C11 551 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 HIST1H2AAQ96QV6 131 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 MYCBPQ99417 103 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-203ENST00000585894 GAL3ST1Q99999 423 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
RETREG3-203ENST00000585894 IGHV3OR15-7A0A075B7D8 119 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 ANKRD61A6NGH8 418 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 MT-ND2P03891 347 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 ISG15P05161 165 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 IRF2P14316 349 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 MED21Q13503 144 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 UBE2V2Q15819 145 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 ZBTB37Q5TC79 503 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 WDR82Q6UXN9 313 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 PEG10Q86TG7 708 aaKnown RBP10.59□□□□□ -0.71
RETREG3-203ENST00000585894 GCSAMQ8N6F7 178 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 NANOGP1Q8N7R0 232 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 LRRC29Q8WV35 223 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 MYDGFQ969H8 173 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 MSI2Q96DH6 328 aaKnown RBP10.59□□□□□ -0.71
RETREG3-203ENST00000585894 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 DUSP21Q9H596 190 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 RNF7Q9UBF6 113 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 TPRKBQ9Y3C4 175 aa10.59□□□□□ -0.71
RETREG3-203ENST00000585894 NIPBLQ6KC79 2804 aaeCLIP10.58□□□□□ -0.71
RETREG3-203ENST00000585894 FAM230AA0A1W2PPH8 454 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 DHRS7CA6NNS2 312 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 RHBDL1O75783 438 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ZNF20P17024 532 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 SOX2P48431 317 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 CDH15P55291 814 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 WNT4P56705 351 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 SEC61A1P61619 476 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 GNG3P63215 75 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 MZT1Q08AG7 82 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ZNF181Q2M3W8 571 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 RPL22L1Q6P5R6 122 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 BATF2Q8N1L9 274 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 HPS1Q92902 700 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ERGIC1Q969X5 290 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 CHST5Q9GZS9 411 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 COMMD4Q9H0A8 199 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TLNRD1Q9H1K6 362 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 OR51I2Q9H344 312 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ZNF665Q9H7R5 613 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TRIM36Q9NQ86 728 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 FN1P02751 2386 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 WNK2Q9Y3S1 2297 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 HIVEP2P31629 2446 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 IGKV1-27A0A075B6S5 117 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 PPIAL4EA0A075B759 164 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 PQLC2LA1A4F0 135 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 PPIAL4DF5H284 164 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 OGG1O15527 345 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 DENRO43583 198 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 RGS10O43665 173 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 IGHV2-5P01817 119 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 PPIAL4FP0DN26 164 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 MDH2P40926 338 aaKnown RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 MAP2K4P45985 399 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 IRF3Q14653 427 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 FAM76BQ5HYJ3 339 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 HAGHLQ6PII5 290 aaPredicted RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 RNF144BQ7Z419 303 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 LRRC28Q86X40 367 aaPredicted RBP10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ANGPTL5Q86XS5 388 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 C1orf87Q8N0U7 546 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 OR5A2Q8NGI9 324 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ORAI1Q96D31 301 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 SMIM19Q96E16 107 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 ZNF488Q96MN9 340 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TMEM246Q9BRR3 403 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 CDCA4Q9BXL8 241 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 WDR13Q9H1Z4 485 aa10.58□□□□□ -0.72
RETREG3-203ENST00000585894 TMEM165Q9HC07 324 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms