RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 PRSS35Q8N3Z0 413 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 DHRSXQ8N5I4 330 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 OR5A2Q8NGI9 324 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 MRPL48Q96GC5 212 aaKnown RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 HIST1H2AAQ96QV6 131 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 MYCBPQ99417 103 aaPredicted RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 ADI1Q9BV57 179 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 ALG8Q9BVK2 526 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 SSBP3Q9BWW4 388 aaPredicted RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 JAM3Q9BX67 310 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 METTL17Q9H7H0 456 aaPredicted RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 AMBNQ9NP70 447 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 MYRFQ9Y2G1 1151 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 LOC107986453A0A1B0GWG9 222 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 H0YAE9 185 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 CDIPTO14735 213 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 NDUFA2O43678 99 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 NRASP01111 189 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 IFNA2P01563 188 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 UBCP0CG48 685 aaKnown RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 MUC1P15941 1255 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 ZNF12P17014 697 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 PITPNBP48739 271 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 GPM6AP51674 278 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 OR12D2P58182 307 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 SMN1Q16637 294 aaKnown RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 CEP78Q5JTW2 689 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 CLVS2Q5SYC1 327 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 PLCXD3Q63HM9 321 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 SFRP4Q6FHJ7 346 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 FAHD2BQ6P2I3 314 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 C1orf229Q6ZS94 237 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 KCTD8Q6ZWB6 473 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 MOB3CQ70IA8 216 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 TEX29Q8N6K0 151 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 BOLLQ8N9W6 283 aaKnown RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 OR52I1Q8NGK6 324 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 RPL3LQ92901 407 aaKnown RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 FAHD2AQ96GK7 314 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 OR51I2Q9H344 312 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 FGF20Q9NP95 211 aaPredicted RBP12.06□□□□□ -0.48
MKS1-207ENST00000578789 ERVK13-1Q9NX77 482 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 CTSZQ9UBR2 303 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 OR5V1Q9UGF6 321 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
MKS1-207ENST00000578789 ERICH4A6NGS2 130 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 TRAPPC2LH3BP13 241 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 PHF1O43189 567 aaPredicted RBP12.05□□□□□ -0.48
MKS1-207ENST00000578789 SYT7O43581 403 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 AVPP01185 164 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
MKS1-207ENST00000578789 CAPGP40121 348 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 NPY4RP50391 375 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 CCR9P51686 369 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 GNB2P62879 340 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 PAX2Q02962 417 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 ODF4Q2M2E3 257 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 KLHL22Q53GT1 634 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 WDR25Q64LD2 544 aaPredicted RBP12.05□□□□□ -0.48
MKS1-207ENST00000578789 ZNF841Q6ZN19 808 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 C1QL2Q7Z5L3 287 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 CNIH3Q8TBE1 160 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 C12orf43Q96C57 262 aaKnown RBP12.05□□□□□ -0.48
MKS1-207ENST00000578789 C10orf35Q96D05 121 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 PELI1Q96FA3 418 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 C4orf36Q96KX1 117 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 VCXQ9H320 206 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 MMP26Q9NRE1 261 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 FRRS1LQ9P0K9 344 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 KAAG1Q9UBP8 84 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
MKS1-207ENST00000578789 OPN4Q9UHM6 478 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 INSIG2Q9Y5U4 225 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 HSPE1-MOB4S4R3N1 261 aa12.05□□□□□ -0.48
MKS1-207ENST00000578789 ANKRD61A6NGH8 418 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 J3QLW9 94 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 ISG15P05161 165 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 HTR1AP08908 422 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 ZNF19P17023 458 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 NANOS3P60323 173 aaKnown RBP12.04□□□□□ -0.48
MKS1-207ENST00000578789 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 MRPL28Q13084 256 aaKnown RBP12.04□□□□□ -0.48
MKS1-207ENST00000578789 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 LHFPL3Q86UP9 236 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 CHST5Q9GZS9 411 aa12.04□□□□□ -0.48
MKS1-207ENST00000578789 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms