RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 RNASE12Q5GAN4 147 aaKnown RBP11.9□□□□□ -0.5
TPM1-215ENST00000558868 TMEM211Q6ICI0 200 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 PAQR4Q8N4S7 273 aaPredicted RBP11.9□□□□□ -0.5
TPM1-215ENST00000558868 DUSP18Q8NEJ0 188 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 OR56B2PQ8NGI1 322 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 OR56B1Q8NGI3 324 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 UBASH3BQ8TF42 649 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 TMEM59Q9BXS4 323 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 METTL9Q9H1A3 318 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 KCNK15Q9H427 330 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.5
TPM1-215ENST00000558868 NOP16Q9Y3C1 178 aaKnown RBP11.9□□□□□ -0.5
TPM1-215ENST00000558868 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 FAM230AA0A1W2PPH8 454 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 ANKRD30BLA7E2S9 258 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 CD300LBA8K4G0 201 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 H7C417 338 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 CDC14BO60729 498 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 KDM4BO94953 1096 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 MPIG6BO95866 241 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 NGFP01138 241 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 CSF1P09603 554 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 PSMB1P20618 241 aaKnown RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 RAD52P43351 418 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 CASP6P55212 293 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 ACTBP60709 375 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 ACTG1P63261 375 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 UNC119Q13432 240 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 KLF9Q13886 244 aaPredicted RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 TIMM23BQ5SRD1 257 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 OR10K2Q6IF99 312 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 ZDHHC23Q8IYP9 409 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 NAXEQ8NCW5 288 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 COPZ2Q9P299 210 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 MYEF2Q9P2K5 600 aaKnown RBP11.89□□□□□ -0.51
TPM1-215ENST00000558868 MTFP1Q9UDX5 166 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 MPC1Q9Y5U8 109 aa11.89□□□□□ -0.51
TPM1-215ENST00000558868 A0A1W2PR80 420 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 ZNF850A8MQ14 1090 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 SMPD2O60906 423 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 LPLP06858 475 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 KIR2DL3P43628 341 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 PPP1CBP62140 327 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 RPS27AP62979 156 aaKnown RBP11.88□□□□□ -0.51
TPM1-215ENST00000558868 PRDX4Q13162 271 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 SLC22A6Q4U2R8 563 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 ZNF474Q6S9Z5 364 aaPredicted RBP11.88□□□□□ -0.51
TPM1-215ENST00000558868 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 C3P1Q6ZMU1 363 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 RFPL4BQ6ZWI9 263 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 BIVMQ86UB2 503 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 RPRMLQ8N4K4 120 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 ZSCAN4Q8NAM6 433 aaPredicted RBP11.88□□□□□ -0.51
TPM1-215ENST00000558868 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 OR10R2Q8NGX6 335 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 MUCL1Q96DR8 90 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 WBP1Q96G27 269 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 LPAR5Q9H1C0 372 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
TPM1-215ENST00000558868 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
TPM1-215ENST00000558868 ZNF107Q9UII5 783 aaPredicted RBP11.88□□□□□ -0.51
TPM1-215ENST00000558868 PTPRQQ9UMZ3 2332 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 ANKRD20A5PA0PJZ0 165 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 A8MXE2 369 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 RAB27BO00194 218 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 CSTBP04080 98 aaKnown RBP11.87□□□□□ -0.51
TPM1-215ENST00000558868 MELTFP08582 738 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 CELA3BP08861 270 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
TPM1-215ENST00000558868 RAC2P15153 192 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 SLC6A1P30531 599 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 SRP9P49458 86 aaKnown RBP11.87□□□□□ -0.51
TPM1-215ENST00000558868 VEGFCP49767 419 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 UCP2P55851 309 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 ZP1P60852 638 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 HLXQ14774 488 aaPredicted RBP11.87□□□□□ -0.51
TPM1-215ENST00000558868 RSU1Q15404 277 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 CDNFQ49AH0 187 aa11.87□□□□□ -0.51
TPM1-215ENST00000558868 CRIP3Q6Q6R5 217 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms