RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TTRP02766 147 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 FCGR1AP12314 374 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 GABRA2P47869 451 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 NXNL2Q5VZ03 156 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 TEX36Q5VZQ5 186 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 CD276Q5ZPR3 534 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 PLCXD3Q63HM9 321 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 C3orf56Q8N813 242 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 YIPF7Q8N8F6 280 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 OR10H4Q8NGA5 316 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
SMAD3-208ENST00000558827 DUS3LQ96G46 650 aaKnown RBP10.36□□□□□ -0.75
SMAD3-208ENST00000558827 PRRG3Q9BZD7 231 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 ELL3Q9HB65 397 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-208ENST00000558827 HAO2Q9NYQ3 351 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 ONECUT1Q9UBC0 465 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 OR52A1Q9UKL2 312 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 TMEM14AQ9Y6G1 99 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 TMEM89A2RUT3 159 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF879B4DU55 563 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 NDUFA2O43678 99 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF254O75437 659 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 INMTO95050 263 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 PLATP00750 562 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 OMGP23515 440 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 CPT2P23786 658 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 PRTN3P24158 256 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ATP6V1E1P36543 226 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 NPY4RP50391 375 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ROM1Q03395 351 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 RIPPLY1Q0D2K3 151 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF829Q3KNS6 432 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-208ENST00000558827 BCL2L15Q5TBC7 163 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 GPR157Q5UAW9 335 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 HAGHLQ6PII5 290 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-208ENST00000558827 DEGS2Q6QHC5 323 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 CCDC121Q6ZUS5 278 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ASRGL1Q7L266 308 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 FTMTQ8N4E7 242 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ZFAND2BQ8WV99 257 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 ASB17Q8WXJ9 295 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 EME1Q96AY2 570 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 WDFY2Q96P53 400 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 OSBPL10Q9BXB5 764 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 TRIM36Q9NQ86 728 aa10.35□□□□□ -0.75
SMAD3-208ENST00000558827 A0A0U1RQV5 110 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 CENPVL3A0A0U1RRI6 287 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 A0A1W2PQL4 384 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 NDUFB3O43676 98 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 SRSF10O75494 262 aaKnown RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 MUC1P15941 1255 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 NDUFB7P17568 137 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 GLRA1P23415 457 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 MTNR1AP48039 350 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 SNCBQ16143 134 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 AWAT1Q58HT5 328 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 METTL11BQ5VVY1 283 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 STUMQ69YW2 141 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 GID4Q8IVV7 300 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 PNLDC1Q8NA58 520 aaKnown RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 TRMT10AQ8TBZ6 339 aaKnown RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 GAFA1Q96PS6 74 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 RAB3IPQ96QF0 476 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 TLNRD1Q9H1K6 362 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 OR51I2Q9H344 312 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 SIRT7Q9NRC8 400 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 CLN6Q9NWW5 311 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 NUFIP1Q9UHK0 495 aaKnown RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
SMAD3-208ENST00000558827 PCDHGB1Q9Y5G3 927 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 R4GMQ9 66 aa10.34□□□□□ -0.75
SMAD3-208ENST00000558827 A0A1B0GTI1 187 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 ACOD1A6NK06 481 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 H3BNX3 289 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 EI24O14681 340 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 SYNGR1O43759 233 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 NRASP01111 189 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 KRT8P05787 483 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 MMP9P14780 707 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 HTR1FP30939 366 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 DCTDP32321 178 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 TGM4P49221 684 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 CEBPDP49716 269 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-208ENST00000558827 GNG3P63215 75 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 KLRD1Q13241 179 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 DGUOKQ16854 277 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 TP53I3Q53FA7 332 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 SLC36A1Q7Z2H8 476 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 ELMOD2Q8IZ81 293 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 PNKDQ8N490 385 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 OR10Z1Q8NGY1 313 aa10.33□□□□□ -0.76
SMAD3-208ENST00000558827 RBM4BQ9BQ04 359 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms