RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ARL6IP1Q15041 203 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 SMAD2Q15796 467 aaKnown RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 SHISA6Q6ZSJ9 500 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF561Q8N587 486 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF784Q8NCA9 323 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 THAP3Q8WTV1 239 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 SMIM3Q9BZL3 60 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 FAM212BQ9NTI7 297 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 TUBD1Q9UJT1 453 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 FOXI3A8MTJ6 420 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 UBE2CO00762 179 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF44P15621 663 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ANOS1P23352 680 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 CSNK1EP49674 416 aaKnown RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ACY1Q03154 408 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 SULF2Q8IWU5 870 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 OR14K1Q8NGZ2 314 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 SDHAF3Q9NRP4 125 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF701Q9NV72 531 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 CLEC1BQ9P126 229 aa15.44■□□□□ 0.06
SYNE3-202ENST00000553340 ZMAT5Q9UDW3 170 aaKnown RBP15.44■□□□□ 0.06
SYNE3-202ENST00000553340 A0A1B0GX78 115 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 PRF1P14222 555 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF41P51814 821 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-202ENST00000553340 HGFACQ04756 655 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 DMRTC1Q5HYR2 192 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 CARD17Q5XLA6 110 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 C1QL2Q7Z5L3 287 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 UBAC2Q8NBM4 344 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 PNRC2Q9NPJ4 139 aaKnown RBP15.43■□□□□ 0.06
SYNE3-202ENST00000553340 AMDHD2Q9Y303 409 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 STARD10Q9Y365 291 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 LSM5Q9Y4Y9 91 aaKnown RBP15.43■□□□□ 0.06
SYNE3-202ENST00000553340 EFNA2O43921 213 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 CBR1P16152 277 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 SERPINA2P20848 420 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 ALDH3B1P43353 468 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 SLC25A47Q6Q0C1 308 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 SLC16A13Q7RTY0 426 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 COMMD1Q8N668 190 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 PLPP5Q8NEB5 264 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 SEMA6DQ8NFY4 1073 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 TCEAL3Q969E4 200 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF251Q9BRH9 671 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 NAA11Q9BSU3 229 aaPredicted RBP15.43■□□□□ 0.06
SYNE3-202ENST00000553340 RGCCQ9H4X1 137 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 PLEKHA2Q9HB19 425 aa15.43■□□□□ 0.06
SYNE3-202ENST00000553340 FOLR1P15328 257 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 GRB2P62993 217 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 DLX2Q07687 328 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 EIF3IQ13347 325 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 RTL6Q6ICC9 239 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 RBMS3Q6XE24 437 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 KDF1Q8NAX2 398 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 NPRL2Q8WTW4 380 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 RLN3Q8WXF3 142 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 MRGPRX4Q96LA9 322 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 S100A13Q99584 98 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF2Q9BSG1 426 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 SLC2A4RGQ9NR83 387 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 STMND1H3BQB6 276 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 FABP1P07148 127 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 SNRNP70P08621 437 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 NAT2P11245 290 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 AGAP20933 346 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 C14orf28Q4W4Y0 310 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 AWAT1Q58HT5 328 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 GGNBP1Q5YKI7 109 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 MRPL38Q96DV4 380 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 PARP12Q9H0J9 701 aaKnown RBP15.42■□□□□ 0.06
SYNE3-202ENST00000553340 TUBA4BQ9H853 241 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 KLRF1Q9NZS2 232 aa15.42■□□□□ 0.06
SYNE3-202ENST00000553340 C7orf77A4D0Y5 90 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 ETV2O00321 342 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-202ENST00000553340 TRAF3IP2O43734 574 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-202ENST00000553340 CTSDP07339 412 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-202ENST00000553340 THBS4P35443 961 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 SNCAP37840 140 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 PPA1Q15181 289 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 MIDNQ504T8 468 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 LCN10Q6JVE6 187 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 PGAM5Q96HS1 289 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 SHDQ96IW2 340 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 PPP4R1LQ9P1A2 415 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 CA11O75493 328 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 SCGB1D2O95969 90 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 FOXL2P58012 376 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 OR1D5P58170 312 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 APCDD1LQ8NCL9 501 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 ADPRHL1Q8NDY3 354 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 OR6X1Q8NH79 312 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 TCEAL7Q9BRU2 100 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 TM2D1Q9BX74 207 aa15.41■□□□□ 0.06
SYNE3-202ENST00000553340 ARID1AO14497 2285 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 CRYM-AS1A6NIL9 109 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 OPN1LWP04000 364 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 QDPRP09417 244 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF14P17017 642 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 CD38P28907 300 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms