RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 PHOX2AO14813 284 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 CDC14BO60729 498 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 ZNF217O75362 1048 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 RAD51DO75771 328 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 HLA-DOBP13765 273 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 HIST1H1BP16401 226 aaKnown RBP11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 PGCP20142 388 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 PTGER4P35408 488 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 SFTPA2Q8IWL1 248 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 KDF1Q8NAX2 398 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 MISP3Q96FF7 219 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 KCNIP3Q9Y2W7 256 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 HDGFL3Q9Y3E1 203 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 TMED7-TICAM2A0A0A6YYA0 188 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 SMCO3A2RU48 225 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 E5RGE8 158 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 ISG15P05161 165 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 ZNF542PQ5EBM4 170 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 SLAMF6Q96DU3 332 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 BSCL2Q96G97 398 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 ADAM19Q9H013 955 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 OR10A2Q9H208 303 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 CYP8B1Q9UNU6 501 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
SFSWAP-209ENST00000540469 H3BQ15 152 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 GNRH1P01148 92 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TTRP02766 147 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TRGC2P03986 189 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 APODP05090 189 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 HOXC4P09017 264 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 KLK2P20151 261 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 FBXW4P57775 412 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 FXYD4P59646 89 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 PKIAP61925 76 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 LFNGQ8NES3 379 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 GPR119Q8TDV5 335 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 RSC1A1Q92681 617 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 HOXB13Q92826 284 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 RAB39BQ96DA2 213 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 B3GALT1Q9Y5Z6 326 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 MT-ATP6P00846 226 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 SPEM2Q0P670 501 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 HIST2H3PS2Q5TEC6 136 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 ZNF321PQ8N8H1 164 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 ZFP62Q8NB50 900 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 MED29Q9NX70 200 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 A0A087WZY1 265 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 A0A0A6YYD4 124 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 OR5H15A6NDH6 313 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TCAPO15273 167 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 SNRPCP09234 159 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 OMGP23515 440 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 GJA4P35212 333 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 PCP4P48539 62 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 UBE2V2Q15819 145 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 GAB4Q2WGN9 574 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 KHDC3LQ587J8 217 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 FBXW12Q6X9E4 464 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 PRSS58Q8IYP2 241 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 ZNF519Q8TB69 540 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TCTN2Q96GX1 697 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 GNRHR2Q96P88 292 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 MESP1Q9BRJ9 268 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 EMC6Q9BV81 110 aa11.36□□□□□ -0.59
SFSWAP-209ENST00000540469 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 CDRT15L2A8MXV6 281 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 H0YL77 283 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 SLC26A5P58743 744 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 TAS2R60P59551 318 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 NFATC4Q14934 902 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 FAM189A2Q15884 450 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 AADACL3Q5VUY0 350 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 SPRED2Q7Z698 418 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 SLC26A10Q8NG04 563 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 REEP6Q96HR9 211 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 NIPSNAP3BQ9BS92 247 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 FOXS1O43638 330 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 APCDD1LQ8NCL9 501 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 OR2AJ1Q8NGZ0 328 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 OR2G3Q8NGZ4 309 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 Q8WTZ3 238 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
SFSWAP-209ENST00000540469 GUSBP08236 651 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms