RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 USP43Q70EL4 1123 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 PIANPQ8IYJ0 282 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SAMD12Q8N8I0 201 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 WDR31Q8NA23 367 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 DEFB124Q8NES8 71 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 OR56B4Q8NH76 319 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SPPL2AQ8TCT8 520 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 PTH2Q96A98 100 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 FLYWCH2Q96CP2 140 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 SGTBQ96EQ0 304 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 PACRGQ96M98 296 aaPredicted RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 AGMATQ9BSE5 352 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 C1QTNF4Q9BXJ3 329 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 CALN1Q9BXU9 219 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 TSGA10Q9BZW7 698 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 WDR13Q9H1Z4 485 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 GAREM1Q9H706 876 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 DDX31Q9H8H2 851 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 EXOSC3Q9NQT5 275 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 PRODH2Q9UF12 536 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 ACOT9Q9Y305 439 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 GOLT1BQ9Y3E0 138 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 ZNF337Q9Y3M9 751 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 FRYQ5TBA9 3013 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SHROOM3Q8TF72 1996 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 LRRK1Q38SD2 2015 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 UNC13CQ8NB66 2214 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 IGHV4OR15-8A0A075B7B6 117 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 A0A0B4J2E0 115 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 A0A1B0GX12 115 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 A0A1W2PR80 420 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 A0A1W2PS18 150 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
MRE11-209ENST00000540013 NPIPB9F8W1W9 429 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 H0Y980 276 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 H7C2Y5 167 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 PPP1R3DO95685 299 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 NGFP01138 241 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 GCGP01275 180 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 HLA-AP01891 365 aaKnown RBP4.85□□□□□ -1.63
MRE11-209ENST00000540013 OR4E1P0C645 316 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 CD1DP15813 335 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 HIST1H1CP16403 213 aaKnown RBP4.85□□□□□ -1.63
MRE11-209ENST00000540013 PSMD8P48556 350 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 KLK7P49862 253 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 MFAP2P55001 183 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 MYL5Q02045 173 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 IL18R1Q13478 541 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 CST6Q15828 149 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 GCSAMLQ5JQS6 135 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 GPRC6AQ5T6X5 926 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 MEDAGQ5VYS4 303 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 LPCAT4Q643R3 524 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 ZNF57Q68EA5 555 aaPredicted RBP4.85□□□□□ -1.63
MRE11-209ENST00000540013 WDR82Q6UXN9 313 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 LHFPL3Q86UP9 236 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 CCDC71Q8IV32 467 aaPredicted RBP4.85□□□□□ -1.63
MRE11-209ENST00000540013 STK40Q8N2I9 435 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 ZNRF1Q8ND25 227 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 ACTL9Q8TC94 416 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 MCOLN3Q8TDD5 553 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 RASL10AQ92737 203 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 HGDQ93099 445 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 C11orf52Q96A22 123 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 RAD51AP1Q96B01 352 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 CMTM7Q96FZ5 175 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 ST6GAL2Q96JF0 529 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 RNF145Q96MT1 663 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 HBEGFQ99075 208 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 WDR41Q9HAD4 459 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 IFT46Q9NQC8 304 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 C8orf4Q9NR00 106 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 FBXL12Q9NXK8 326 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 BTNL2Q9UIR0 455 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 RIMS3Q9UJD0 308 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 PPP1R3CQ9UQK1 317 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 SNX24Q9Y343 169 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 TIMM22Q9Y584 194 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 WIF1Q9Y5W5 379 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 USH1CQ9Y6N9 552 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 V9GYQ6 96 aa4.85□□□□□ -1.63
MRE11-209ENST00000540013 SPEGQ15772 3267 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 ANKRD11Q6UB99 2663 aaPredicted RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 CACNA1GO43497 2377 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 IGLV3-10A0A075B6K4 115 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 SAA2-SAA4A0A096LPE2 208 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 A0A1B0GVI7 797 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 SPAARA0A1B0GVQ0 90 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 IGLON5A6NGN9 336 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 FTCDNL1E5RQL4 147 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 PRSS44E7EML9 344 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 G3V3Y1 287 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 HAT1O14929 419 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 FGF16O43320 207 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 CDC40O60508 579 aaKnown RBP eCLIP4.84□□□□□ -1.63
MRE11-209ENST00000540013 HPGDSO60760 199 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 MPZL1O95297 269 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms