RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GUCY2DQ02846 1103 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TNFRSF9Q07011 255 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 RBM39Q14498 530 aaKnown RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 PPP1R7Q15435 360 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TAF13Q15543 124 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 PCK2Q16822 640 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 DGUOKQ16854 277 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 C1orf134Q5TEV5 83 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 AP1ARQ63HQ0 302 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 NANOGP8Q6NSW7 305 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TNFAIP8L2Q6P589 184 aaPredicted RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 ZDHHC24Q6UX98 284 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 ZCCHC23Q6ZST2 131 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 KCTD20Q7Z5Y7 419 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 CTAGE3PQ8IX95 158 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 PGAM4Q8N0Y7 254 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 CLEC4FQ8N1N0 589 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 STPG2Q8N412 459 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 DEFB125Q8N687 156 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 GCSAMQ8N6F7 178 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TMEM185AQ8NFB2 350 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 SFXN5Q8TD22 340 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 MAGOHBQ96A72 148 aaKnown RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 SEH1LQ96EE3 360 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TEX37Q96LM6 180 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TMEM237Q96Q45 408 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 EPYCQ99645 322 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 CPNE1Q99829 537 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 BPIFA3Q9BQP9 254 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 OVOL2Q9BRP0 275 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 ADAT1Q9BUB4 502 aaKnown RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 SRD5A3Q9H8P0 318 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 CACYBPQ9HB71 228 aaKnown RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 CHCHD3Q9NX63 227 aaKnown RBP2.94□□□□□ -1.94
YBX3-205ENST00000536107 BAIAP2L1Q9UHR4 511 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 STK38LQ9Y2H1 464 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 NDUFAF1Q9Y375 327 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 MOB4Q9Y3A3 225 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 HSPE1-MOB4S4R3N1 261 aa2.94□□□□□ -1.94
YBX3-205ENST00000536107 TRBV5-3A0A0A0MS03 114 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 RNF103-CHMP3A0A140T963 221 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 A0A1W2PPL8 197 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 C12orf71A8MTZ7 269 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PLPP3O14495 311 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 KLHL2O95198 593 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 SLC2A10O95528 541 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 IFNA10P01566 189 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 TFF1P04155 84 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 DBIP07108 87 aaKnown RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 CST2P09228 141 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 RBP1P09455 135 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 FAM106CPP0CH98 169 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PGA4P0DJD7 388 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PGA3P0DJD8 388 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 CCL3L1P16619 93 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 NAA10P41227 235 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 FRKP42685 505 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 GNB1P62873 340 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 RPL31P62899 125 aaKnown RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 MRPS34P82930 218 aaKnown RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 MZT1Q08AG7 82 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 C2orf54Q08AI8 447 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 HES1Q14469 280 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 LGALS9BQ3B8N2 356 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 LDLRAD2Q5SZI1 272 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 GRTP1Q5TC63 336 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 MINOS1Q5TGZ0 78 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 C5orf46Q6UWT4 87 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 ZYG11AQ6WRX3 759 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 FBXW12Q6X9E4 464 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 LINC00322Q6ZN03 302 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 KCTD8Q6ZWB6 473 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 TMPRSS11FQ6ZWK6 438 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 SPATA12Q7Z6I5 190 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PEX5LQ8IYB4 626 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 ZDHHC23Q8IYP9 409 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 CCDC170Q8IYT3 715 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 CENPLQ8N0S6 344 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 POM121L12Q8N7R1 296 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PCYOX1LQ8NBM8 494 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 FBXO36Q8NEA4 188 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 OR4M1Q8NGD0 313 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 OR5K1Q8NHB7 308 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 SLC7A6Q92536 515 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 LRGUKQ96M69 825 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 KCNA7Q96RP8 456 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 CHCHD6Q9BRQ6 235 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 TM2D2Q9BX73 214 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 PARD6BQ9BYG5 372 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 NUF2Q9BZD4 464 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 MFFQ9GZY8 342 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 SLC22A4Q9H015 551 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 OR51J1Q9H342 316 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 MTHFD2LQ9H903 347 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 GNB4Q9HAV0 340 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms