RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 C5orf63A6NC05 138 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 PRMT5O14744 637 aaPredicted RBP2.36□□□□□ -2.03
PRKDC-205ENST00000535375 PSPHP1O15172 72 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 ALOX12BO75342 701 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 UPK1BO75841 260 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 SMC2O95347 1197 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 PTHP01270 115 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 IGLV2-8P01709 118 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 CCDC172P0C7W6 258 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 BGNP21810 368 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 HTR2CP28335 458 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 PCK1P35558 622 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 ARL2P36404 184 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 HADHBP55084 474 aaKnown RBP2.36□□□□□ -2.03
PRKDC-205ENST00000535375 MLF1P58340 268 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 TAS2R31P59538 309 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 TAS2R60P59551 318 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 RPL31P62899 125 aaKnown RBP2.36□□□□□ -2.03
PRKDC-205ENST00000535375 CYP24A1Q07973 514 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 ST3GAL4Q11206 333 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 TMED1Q13445 227 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 OR8K3Q8NH51 312 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 OR51A7Q8NH64 312 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 MSANTD3Q96H12 275 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 RNF170Q96K19 258 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 TSNAXQ99598 290 aaKnown RBP2.36□□□□□ -2.03
PRKDC-205ENST00000535375 TBL1YQ9BQ87 522 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 RSG1Q9BU20 258 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 C1orf198Q9H425 327 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 ADGRL1O94910 1474 aa2.36□□□□□ -2.03
PRKDC-205ENST00000535375 CCL15-CCL14A0A0B4J2E2 113 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 ANKRD20A5PA0PJZ0 165 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 OR5H1A6NKK0 313 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 NDUFC2-KCTD14E9PQ53 114 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 LGALS9O00182 355 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 PSMD11O00231 422 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 CHST10O43529 356 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 GATCO43716 136 aaKnown RBP2.35□□□□□ -2.03
PRKDC-205ENST00000535375 SERPINB7O75635 380 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 IGLV3-25P01717 112 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 MT-ND4P03905 459 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 TPM1P09493 284 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF688P0C7X2 276 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 SLC35A1P78382 337 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 IFITM3Q01628 133 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 INCA1Q0VD86 236 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 CCL15Q16663 113 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 C18orf21Q32NC0 220 aaPredicted RBP2.35□□□□□ -2.03
PRKDC-205ENST00000535375 C6orf99Q4VX62 202 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 DUPD1Q68J44 220 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 EPGNQ6UW88 154 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 DRAM1Q8N682 238 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 LINC00469Q8N7U9 141 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 OR1J4Q8NGS1 313 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 OR1L1Q8NH94 360 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 NDNFQ8TB73 568 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 ENKURQ8TC29 256 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 RXFP2Q8WXD0 754 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 TMIGD2Q96BF3 282 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 OR4K3Q96R72 315 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 KCNS3Q9BQ31 491 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 SFXN3Q9BWM7 321 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 PLA2G12AQ9BZM1 189 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 RAB1BQ9H0U4 201 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 SYT4Q9H2B2 425 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 CSNK1G1Q9HCP0 422 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 EXOSC4Q9NPD3 245 aaKnown RBP2.35□□□□□ -2.03
PRKDC-205ENST00000535375 HEBP1Q9NRV9 189 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 TFR2Q9UP52 801 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 V9GYY9 64 aa2.35□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF608Q9ULD9 1512 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 E7EWF7 191 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 RNF113AO15541 343 aaKnown RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 PAHP00439 452 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 SLC35G6P0C7Q6 338 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 CCL2P13500 99 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 P2RY2P41231 377 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 GPR4P46093 362 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 C2orf54Q08AI8 447 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 TAL2Q16559 108 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 TAF9Q16594 264 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 NDUFAF6Q330K2 333 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 C6orf183Q5T699 404 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ST13P4Q8IZP2 240 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 SLC7A5P1Q8MH63 180 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 SPERTQ8NA61 448 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 OR6N2Q8NGY6 317 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ZFAND1Q8TCF1 268 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 GHSRQ92847 366 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 RERGQ96A58 199 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 STMN4Q9H169 189 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ANKHQ9HCJ1 492 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF586Q9NXT0 402 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF229Q9UJW7 825 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 ACOT9Q9Y305 439 aa2.34□□□□□ -2.03
PRKDC-205ENST00000535375 RBMX2Q9Y388 322 aaKnown RBP2.34□□□□□ -2.03
PRKDC-205ENST00000535375 LOC100506127A0A0U1RQW1 187 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 GOLGA8JA6NMD2 632 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms