RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 GPX5O75715 221 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 SC5DO75845 299 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 MAS1P04201 325 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 ADH4P08319 380 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 OCMP0CE72 109 aaPredicted RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 MAPK3P27361 379 aaPredicted RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 CD200P41217 278 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 CRYBB2P43320 205 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 ALDH3B2P48448 385 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 SRP9P49458 86 aaKnown RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 ATP5J2P56134 94 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 CNN3Q15417 329 aaKnown RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 CARTPTQ16568 116 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 PCGF3Q3KNV8 242 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 CEACAM21Q3KPI0 293 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 FAM209AQ5JX71 171 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 UTS2BQ765I0 119 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 MOGAT3Q86VF5 341 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 OR1M1Q8NGA1 313 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 RPL3LQ92901 407 aaKnown RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 CHCHD6Q9BRQ6 235 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 RNF167Q9H6Y7 350 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 NKIRAS2Q9NYR9 191 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 FBXO9Q9UK97 447 aaPredicted RBP11.62□□□□□ -0.55
CD44-224ENST00000526669 STUB1Q9UNE7 303 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 SLC7A11Q9UPY5 501 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
CD44-224ENST00000526669 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 ARHGAP32A7KAX9 2087 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 AKAP9Q99996 3911 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 IGKV1-27A0A075B6S5 117 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 SULT1B1O43704 296 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 PLATP00750 562 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 CD55P08174 381 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 HCKP08631 526 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 IGFBP3P17936 291 aaPredicted RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 RAB3AP20336 220 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 COL8A2P25067 703 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 TGFBR1P36897 503 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 HOXA4Q00056 320 aaPredicted RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 TESK1Q15569 626 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 MPPED2Q15777 294 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 DEFB113Q30KQ7 82 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 HSD17B12Q53GQ0 312 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 C22orf42Q6IC83 251 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 KRT74Q7RTS7 529 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 GPR141Q7Z602 305 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 OR5D14Q8NGL3 314 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 NEU4Q8WWR8 484 aaPredicted RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 YIPF5Q969M3 257 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 ITFG2Q969R8 447 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 C14orf119Q9NWQ9 140 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 DCAF16Q9NXF7 216 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 SSR3Q9UNL2 185 aa11.61□□□□□ -0.55
CD44-224ENST00000526669 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
CD44-224ENST00000526669 MED13LQ71F56 2210 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 TRDV1A0A1B0GX56 115 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 SSX4O60224 188 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 UCHL1P09936 223 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 DAOP14920 347 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 FSTP19883 344 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 CALRP27797 417 aaKnown RBP11.6□□□□□ -0.55
CD44-224ENST00000526669 PMELP40967 661 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 POU3F4P49335 361 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 EFNA4P52798 201 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 PPP3R1P63098 170 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 GNG3P63215 75 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 ZNF154Q13106 437 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 SATL1Q86VE3 508 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 BATF2Q8N1L9 274 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 SPERTQ8NA61 448 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 DNAAF1Q8NEP3 725 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 OR52N4Q8NGI2 321 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 OR5A2Q8NGI9 324 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 FUNDC2Q9BWH2 189 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 NAA50Q9GZZ1 169 aaKnown RBP11.6□□□□□ -0.55
CD44-224ENST00000526669 TCF7L1Q9HCS4 588 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 ZNF701Q9NV72 531 aaPredicted RBP11.6□□□□□ -0.55
CD44-224ENST00000526669 BEX4Q9NWD9 120 aaPredicted RBP11.6□□□□□ -0.55
CD44-224ENST00000526669 TXNL4BQ9NX01 149 aaKnown RBP11.6□□□□□ -0.55
CD44-224ENST00000526669 CKLFQ9UBR5 152 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 EDARQ9UNE0 448 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
CD44-224ENST00000526669 CSMD1Q96PZ7 3565 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 hCG_1807616A0A1W2PRN6 198 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 PQLC2LA1A4F0 135 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms