RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 J3QR06 171 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 NTN3O00634 580 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ACOT8O14734 319 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 TNFRSF13BO14836 293 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF432O94892 652 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PROSCO94903 275 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF205O95201 554 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 SYNGR4O95473 234 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM253P0C7T8 217 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 OR5H8P0DN80 308 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 GZMBP10144 247 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 CREB1P16220 341 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 HIST1H1CP16403 213 aaKnown RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PSMA1P25786 263 aaKnown RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PTGER1P34995 402 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 RGRP47804 291 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 CAV2P51636 162 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 GAS1P54826 345 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 GNG3P63215 75 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 HOXC5Q00444 222 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 IRF9Q00978 393 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF763Q0D2J5 394 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 LTC4SQ16873 150 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 UGT8Q16880 541 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 SNAI3Q3KNW1 292 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 HENMT1Q5T8I9 393 aaKnown RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 CD200R1LQ6Q8B3 271 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PAMR1Q6UXH9 720 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ERASQ7Z444 233 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 GOLGA7Q7Z5G4 137 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 AMER3Q8N944 861 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 OR52B6Q8NGF0 335 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 OR51G2Q8NGK0 314 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 FBXO25Q8TCJ0 367 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 AURKBQ96GD4 344 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 FCRL5Q96RD9 977 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 LINC00470Q9BZP3 86 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 SIRPDQ9H106 197 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 MMP28Q9H239 520 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PRORYQ9H606 182 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 CALHM2Q9HA72 323 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM27Q9HBJ8 222 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 SLC7A10Q9NS82 523 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ANKRD10Q9NXR5 420 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 RALYQ9UKM9 306 aaKnown RBP6.66□□□□□ -1.34
HDAC3-216ENST00000523088 GPR132Q9UNW8 380 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 OR1A2Q9Y585 309 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 COL6A6A6NMZ7 2263 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 AHCTF1Q8WYP5 2266 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 LOC400499M0QZD8 3231 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 EXOC1LA0A1B0GW35 172 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 AQP7P3A6NL99 342 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 C21orf140B9A014 251 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 KIR2DS3K7RE56 304 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 M0QZ24 198 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 AQP7O14520 342 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 CASKO14936 926 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ARPC1BO15143 372 aaKnown RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 TIMM8AO60220 97 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 FOXH1O75593 365 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 IL18BPO95998 194 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 RAB40ALP0C0E4 278 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 UBBP0CG47 229 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ESDP10768 282 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF35P13682 527 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 SELEP16581 610 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 MDH2P40926 338 aaKnown RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 GPR1P46091 355 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 UQCRFS1P47985 274 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 WNT3P56703 355 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 PLP1P60201 277 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 UBA52P62987 128 aaKnown RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 CDK3Q00526 305 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 HHEXQ03014 270 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 TLE3Q04726 772 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 C1orf61Q13536 156 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 KIR2DS3Q14952 304 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 KHDC3LQ587J8 217 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 C3orf38Q5JPI3 329 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 LIPKQ5VXJ0 399 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 NCBP2-AS2Q69YL0 99 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 C19orf48Q6RUI8 117 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 B3GLCTQ6Y288 498 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM182Q6ZP80 229 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ATG4DQ86TL0 474 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 SPACA3Q8IXA5 215 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM217Q8N7C4 229 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF610Q8N9Z0 462 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OR11H4Q8NGC9 324 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OR9Q2Q8NGE9 314 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OR52L1Q8NGH7 329 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OR1J2Q8NGS2 313 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms