RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 FOXF2Q12947 444 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 KLF9Q13886 244 aaPredicted RBP6.26□□□□□ -1.41
MRPS28-205ENST00000519386 C2orf76Q3KRA6 126 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 PABPC1L2AQ5JQF8 200 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 AGAP6Q5VW22 663 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 ZNF57Q68EA5 555 aaPredicted RBP6.26□□□□□ -1.41
MRPS28-205ENST00000519386 Q6ZT83 130 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 NUFIP2Q7Z417 695 aaKnown RBP6.26□□□□□ -1.41
MRPS28-205ENST00000519386 LIX1LQ8IVB5 337 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 CADM3Q8N126 398 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 FTMTQ8N4E7 242 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 ZNF808Q8N4W9 903 aaPredicted RBP6.26□□□□□ -1.41
MRPS28-205ENST00000519386 SEMA6DQ8NFY4 1073 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 OR51D1Q8NGF3 324 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 OR1K1Q8NGR3 316 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 KCNG3Q8TAE7 436 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 APOBEC3DQ96AK3 386 aaPredicted RBP6.26□□□□□ -1.41
MRPS28-205ENST00000519386 LYZL4Q96KX0 146 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 ACTR6Q9GZN1 396 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 CST11Q9H112 138 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 OBP2BQ9NPH6 170 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.26□□□□□ -1.416e-9■■■■■ 33.2
MRPS28-205ENST00000519386 ZNF319Q9P2F9 582 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 MTFP1Q9UDX5 166 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 CRYBG3Q68DQ2 2970 aa6.26□□□□□ -1.41
MRPS28-205ENST00000519386 PRR14LQ5THK1 2151 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 ASH1LQ9NR48 2969 aaKnown RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 HCFC1P51610 2035 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 RTTNQ86VV8 2226 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 A1L4Q6 167 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 LMX1BO60663 402 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 ZNF780AO75290 641 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 IL18BPO95998 194 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 LPLP06858 475 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CHRM2P08172 466 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 HCKP08631 526 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 GSTP1P09211 210 aaKnown RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 NAT2P11245 290 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 TBPP20226 339 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 AGAP20933 346 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 TUBG1P23258 451 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 BTCP35070 178 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 GDNFP39905 211 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 KIR2DL3P43628 341 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 HGFACQ04756 655 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAPQ12884 760 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 GPR176Q14439 515 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 ZMYND11Q15326 602 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 GSG1Q2KHT4 349 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 SNAI3Q3KNW1 292 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CLVS2Q5SYC1 327 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 AWAT2Q6E213 333 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 LHFPL2Q6ZUX7 228 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 C1orf174Q8IYL3 243 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 UBE2J2Q8N2K1 259 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAM169BQ8N8A8 192 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 RELL2Q8NC24 303 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CSNK2A3Q8NEV1 391 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 OR52N4Q8NGI2 321 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 OR4D6Q8NGJ1 314 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 LILRB4Q8NHJ6 448 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 UBASH3BQ8TF42 649 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 BCL2L2Q92843 193 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 PIGTQ969N2 578 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAM46BQ96A09 425 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 REEP6Q96HR9 211 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 FAM71F1Q96KD3 344 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 C1orf147Q96MC9 270 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 NEURL2Q9BR09 285 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 DPAGT1Q9H3H5 408 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 AUNIPQ9H7T9 357 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CNTD2Q9H8S5 307 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 TUBG2Q9NRH3 451 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 ETAA1Q9NY74 926 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 B3GNT2Q9NY97 397 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 IL36GQ9NZH8 169 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 COQ3Q9NZJ6 369 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CGGBP1Q9UFW8 167 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 CLEC4AQ9UMR7 237 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 MRPS28Q9Y2Q9 187 aaKnown RBP6.25□□□□□ -1.41
MRPS28-205ENST00000519386 NUBP2Q9Y5Y2 271 aa6.25□□□□□ -1.41
MRPS28-205ENST00000519386 IGKV1-9A0A0C4DH69 117 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 ZNF816-ZNF321PA0A0X1KG74 233 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 MEIOCA2RUB1 952 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 NKX2-6A6NCS4 301 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 EEF1E1-BLOC1S5C9J1V9 151 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 TPD52L2O43399 206 aaKnown RBP6.24□□□□□ -1.41
MRPS28-205ENST00000519386 LANCL1O43813 399 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 SSX4O60224 188 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 PRAF2O60831 178 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 CA11O75493 328 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 TNFSF13O75888 250 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 CLDN14O95500 239 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 CLDN1O95832 211 aa6.24□□□□□ -1.41
MRPS28-205ENST00000519386 LCATP04180 440 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms