RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZNF395Q9H8N7 513 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-209ENST00000511467 OR5V1Q9UGF6 321 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 OSGIN1Q9UJX0 560 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 GPR52Q9Y2T5 361 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 FAM96BQ9Y3D0 163 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
PTPN13-209ENST00000511467 LRRK2Q5S007 2527 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 PTPN13Q12923 2485 aa4.43□□□□□ -1.7
PTPN13-209ENST00000511467 OPN1SWP03999 348 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PPP1CCP36873 323 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CLDN17P56750 224 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FXYD6P3P58550 94 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ISL1P61371 349 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PKIAP61925 76 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 DEFA5Q01523 94 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 BTLAQ7Z6A9 289 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OR10P1Q8NGE3 313 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SECTM1Q8WVN6 248 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PKIBQ9C010 78 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CXorf36Q9H7Y0 433 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ASF1BQ9NVP2 202 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CFAP20Q9Y6A4 193 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 TRBV9A0A0B4J1U6 114 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FAM166BA8MTA8 275 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 KCNAB3O43448 404 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 MBTPS2O43462 519 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CEACAM1P13688 526 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ATF1P18846 271 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PTNP21246 168 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 MAS1LP35410 378 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 NKX2-1P43699 371 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CTSCP53634 463 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 UCP3P55916 312 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PABPC1L2AQ5JQF8 200 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OR10A7Q8NGE5 316 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ST8SIA4Q92187 359 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SELENOIQ9C0D9 397 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OR2J1Q9GZK6 312 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OPN3Q9H1Y3 402 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 LINC00597Q9H2U6 94 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 VSX1Q9NZR4 365 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OTOGLQ3ZCN5 2332 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 OR52A4PA6NMU1 304 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FAM227AF5H4B4 570 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 KRASP01116 189 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FBXO45P0C2W1 286 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SEC11BP0C7V7 166 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ZNF16P17020 682 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CD79BP40259 229 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 LSSP48449 732 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SPCS3P61009 180 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 RHOBP62745 196 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SIM1P81133 766 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 HTRA3P83110 453 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 EIF4EBP2Q13542 120 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CDKN3Q16667 212 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 LRRC75BQ2VPJ9 315 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 C12orf73Q69YU5 71 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FAM169BQ8N8A8 192 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 C16orf52Q8NHV5 167 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 MARC2Q969Z3 335 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 VCX2Q9H322 139 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 KCNMB2Q9Y691 235 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 TRAV9-1A0A075B6T8 112 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 A8MUA0 341 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 H3BML4 177 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SLC19A1P41440 591 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CLDN20P56880 219 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CFHR1Q03591 330 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PMPCAQ10713 525 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 BNIP3Q12983 259 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 LYG2Q86SG7 212 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CLIP4Q8N3C7 705 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ABHD3Q8WU67 409 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 TNFRSF14Q92956 283 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SMAD5Q99717 465 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 HRASLSQ9HDD0 168 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 TBC1D29Q9UFV1 150 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 COL4A4P53420 1690 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 A0A1W2PR48 441 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ANKRD65E5RJM6 399 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 RAB27BO00194 218 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SOCS6O14544 535 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 CLN5O75503 358 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ERVFRD-1P60508 538 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 UBE2IP63279 158 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 IL24Q13007 206 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PRICKLE4Q2TBC4 344 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 GLYATL3Q5SZD4 288 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PARP16Q8N5Y8 322 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 GCSAMQ8N6F7 178 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SUMF1Q8NBK3 374 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 SNRNP27Q8WVK2 155 aaKnown RBP4.42□□□□□ -1.7
PTPN13-209ENST00000511467 ESAMQ96AP7 390 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 C2orf50Q96LR7 162 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 G6PC2Q9NQR9 355 aa4.42□□□□□ -1.7
PTPN13-209ENST00000511467 PPP5D1E7EU14 171 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms