RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 J3QT63 122 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 SRSF10O75494 262 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 RCBTB2O95199 551 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGKV3-15P01624 115 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 GP1BAP07359 652 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 HOXA9P31269 272 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 PSMB2P49721 201 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 PPOXP50336 477 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 LHX2P50458 406 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 IL5RAQ01344 420 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 PSG7Q13046 419 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 RBMY1FQ15415 496 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRIP13Q15645 432 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 TTC32Q5I0X7 151 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 CEMP1Q6PRD7 247 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 Q6ZT83 130 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 FAM92BQ6ZTR7 304 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 MDP1Q86V88 176 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMEM25Q86YD3 366 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 BBS7Q8IWZ6 715 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 LGI3Q8N145 548 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 LRRC52Q8N7C0 313 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 OR5AK3PQ8NH89 298 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMEM158Q8WZ71 300 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 PTX4Q96A99 478 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 PPWD1Q96BP3 646 aaKnown RBP2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 SMARCD1Q96GM5 515 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 BMFQ96LC9 184 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 OR2M4Q96R27 311 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMEM243Q9BU79 118 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 DSN1Q9H410 356 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 NOX3Q9HBY0 568 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC40A1Q9NP59 571 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 ABCB9Q9NP78 766 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZDHHC4Q9NPG8 344 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 IFT46Q9NQC8 304 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 C1orf109Q9NX04 203 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 ANXA10Q9UJ72 324 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 KIF25-AS1Q9Y6Z4 181 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 COL2A1P02458 1487 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 MROH2BQ7Z745 1585 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 NPHP4O75161 1426 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 A0A0A6YYH2 397 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRAV8-6A0A0B4J262 113 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGKV3D-20A0A0C4DH25 116 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 ISPDA4D126 451 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 A6NJ64 397 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SMLR1H3BR10 107 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 MANBAO00462 879 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 UBDO15205 165 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 CRTAPO75718 401 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SNAP29O95721 258 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRBV12-3P01733 135 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 PCCAP05165 728 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 PET100P0DJ07 73 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TUFMP49411 452 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 RAB38P57729 211 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 UBE2G2P60604 165 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 UBE2IP63279 158 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 CRADDP78560 199 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 PPIDQ08752 370 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 PNOCQ13519 176 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRAM1Q15629 374 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 MPPED2Q15777 294 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMEM249Q2WGJ8 235 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 MFSD14CQ5VZR4 134 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZNF530Q6P9A1 599 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SPICQ8N5J4 248 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 ATP6V1C2Q8NEY4 427 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 OR4K17Q8NGC6 315 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 UBA3Q8TBC4 463 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SFXN5Q8TD22 340 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 PHF10Q8WUB8 498 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 CDS1Q92903 461 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 RILPQ96NA2 401 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 ALS2CR12Q96Q35 445 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMED9Q9BVK6 235 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 DRC3Q9H069 523 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 RPP21Q9H633 154 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 C12orf4Q9NQ89 552 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 DDX19AQ9NUU7 478 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 TMEM100Q9NV29 134 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 DNAJC27Q9NZQ0 273 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SIGLEC7Q9Y286 467 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SNX24Q9Y343 169 aa2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 V9GYY5 206 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC13-208ENST00000505553 SNAPC4Q5SXM2 1469 aa2.65□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGHV5-10-1A0A0J9YXX1 117 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 A0A1W2PRG6 482 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 M0QXV9 152 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 CDIPTO14735 213 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 TOX3O15405 576 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 REM1O75628 298 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 MYO1DO94832 1006 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 S100A6P06703 90 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 RD3LP0DJH9 198 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 ZNF17P17021 662 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 AZU1P20160 251 aa2.65□□□□□ -1.99
TRAPPC13-208ENST00000505553 PSMB5P28074 263 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms