RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KISS1Q15726 138 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 RPUSD4Q96CM3 377 aaKnown RBP14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 RYDENQ9NUL5 291 aaKnown RBP14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 MTFP1Q9UDX5 166 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 MTCH2Q9Y6C9 303 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 SLC25A6P12236 298 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 MOB1BQ7L9L4 216 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 OR5B3Q8NH48 314 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 SMIM7Q9BQ49 75 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 TMEM272A0A1B0GTI8 110 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 HIST1H1DP16402 221 aaKnown RBP14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 EMP3P54852 163 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 TEX261Q6UWH6 196 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 RXFP4Q8TDU9 374 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 U3KQ87 197 aa14.79□□□□□ -0.04
PCDHA1-203ENST00000504120 NUP205Q92621 2012 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CNTRLQ7Z7A1 2325 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 FBXO4Q9UKT5 387 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 ST8SIA5O15466 376 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CD160O95971 181 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 SULT1A3P0DMM9 295 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 SULT1A4P0DMN0 295 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CTRB1P17538 263 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 SPATA46Q5T0L3 261 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 ZBTB37Q5TC79 503 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CTRB2Q6GPI1 263 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 TMEM92Q6UXU6 159 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 OR13D1Q8NGV5 346 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 V9GYS6 101 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 TRGV8A0A0C4DH27 118 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 COL9A1P20849 921 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 NXPH1P58417 271 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 DMRTC1Q5HYR2 192 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 ZNF425Q6IV72 752 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 MAFAQ8NHW3 353 aaPredicted RBP14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CLDN23Q96B33 292 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 TVP23CQ96ET8 276 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 GNRHR2Q96P88 292 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 IGHV1OR15-9A0A0B4J2B8 117 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 NOVA1P51513 510 aaKnown RBP14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 CFHR5Q9BXR6 569 aa14.78□□□□□ -0.04
PCDHA1-203ENST00000504120 TNFRSF1AP19438 455 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 ZBTB25P24278 435 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 AVPR2P30518 371 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 MCHR2Q969V1 340 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 SAT2Q96F10 170 aaPredicted RBP14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 ADAT1Q9BUB4 502 aaKnown RBP14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 SLC35D1Q9NTN3 355 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 H0Y8G0 127 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 CHEK1O14757 476 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 RER1O15258 196 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 PTGFRP43088 359 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 ZNF766Q5HY98 468 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 OCIAD1Q9NX40 245 aa14.77□□□□□ -0.04
PCDHA1-203ENST00000504120 BRWD3Q6RI45 1802 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 CDKN2AP42771 156 aaKnown RBP14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 OR4D9Q8NGE8 314 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 CABLES2Q9BTV7 478 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 FBXO34Q9NWN3 711 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 WNT1P04628 370 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 AANATQ16613 207 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 C17orf107Q6ZR85 190 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 SLC16A12Q6ZSM3 486 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 NDFIP1Q9BT67 221 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 IER2Q9BTL4 223 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 PLSCR3Q9NRY6 295 aa14.77□□□□□ -0.05
PCDHA1-203ENST00000504120 PLPP3O14495 311 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 FGF7P21781 194 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 H3F3AP84243 136 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 ACER2Q5QJU3 275 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 UBE3DQ7Z6J8 389 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 ARHGAP5-AS1Q96IT6 56 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 OR5V1Q9UGF6 321 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 TMED3Q9Y3Q3 217 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 TOX3O15405 576 aaPredicted RBP14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 PRSS23O95084 383 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 HOXB3P14651 431 aaPredicted RBP14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 ZNF816Q0VGE8 651 aaPredicted RBP14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 SSPNQ14714 243 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 COMMD1Q8N668 190 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 PRRX2Q99811 253 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 RAB18Q9NP72 206 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 ZFP64Q9NPA5 681 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 NIT2Q9NQR4 276 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 CROCCQ5TZA2 2017 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 CTAG2O75638 210 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 PCMT1P22061 227 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 TMEM104Q8NE00 496 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 C2CD4CQ8TF44 421 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 CXorf58Q96LI9 332 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 CHRDL1Q9BU40 450 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 MT-CO3P00414 261 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 F2RP25116 425 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 EPHA8P29322 1005 aaPredicted RBP14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 FZD5Q13467 585 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 THSD4Q6ZMP0 1018 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 PLA2G3Q9NZ20 509 aa14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 YBX2Q9Y2T7 364 aaKnown RBP14.76□□□□□ -0.05
PCDHA1-203ENST00000504120 XKRY2A2RUG3 117 aa14.75□□□□□ -0.05
PCDHA1-203ENST00000504120 FAM162BQ5T6X4 162 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 329.4 ms