RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-218	ENST00000498136	LHB	P01229	141 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	PEX2	P28328	305 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	GABPB1	Q06547	395 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	CLVS2	Q5SYC1	327 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	BTNL3	Q6UXE8	466 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	FAM90A1	Q86YD7	464 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR5A2	Q8NGI9	324 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	NANP	Q8TBE9	248 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	LGALS12	Q96DT0	336 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	FGF23	Q9GZV9	251 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	TLNRD1	Q9H1K6	362 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	C8orf4	Q9NR00	106 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	GPR173	Q9NS66	373 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	DNAJB11	Q9UBS4	358 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	EXOG	Q9Y2C4	368 aa	Known RBP	13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	INSIG2	Q9Y5U4	225 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136	AUP1	Q9Y679	476 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136		V9GYS6	101 aa		13.94	□□□□□ -0.18
ABCF3-218	ENST00000498136		A0A1B0GTI1	187 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136		J3QLW9	94 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	AKR7A2	O43488	359 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	ZNF12	P17014	697 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	ZNF19	P17023	458 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	NPY4R	P50391	375 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR12D2	P58182	307 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	ARMCX4	Q5H9R4	360 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	WDR38	Q5JTN6	314 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	TEX36	Q5VZQ5	186 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	WDR25	Q64LD2	544 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	C1QL2	Q7Z5L3	287 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	KCTD20	Q7Z5Y7	419 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	PACRGL	Q8N7B6	248 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR14K1	Q8NGZ2	314 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	MYCBP	Q99417	103 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	CTSZ	Q9UBR2	303 aa		13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	RPL36	Q9Y3U8	105 aa	Known RBP	13.93	□□□□□ -0.18
ABCF3-218	ENST00000498136	IGHV2-70D	A0A0C4DH43	119 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR5B21	A6NL26	309 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	SRRM5	B3KS81	715 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136		J3QRE1	110 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	DLGAP1	O14490	977 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	TMPRSS2	O15393	492 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	CLIC3	O95833	236 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	FADS2	O95864	444 aa	Known RBP	13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	HTR1A	P08908	422 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	UBC	P0CG48	685 aa	Known RBP	13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	MUC1	P15941	1255 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	EPHA1	P21709	976 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	ACTA2	P62736	377 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	ACTG2	P63267	376 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	CDON	Q4KMG0	1287 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	TTC23	Q5W5X9	447 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	ZNF841	Q6ZN19	808 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	LHFPL3	Q86UP9	236 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	PRSS35	Q8N3Z0	413 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR10Z1	Q8NGY1	313 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	RAB40A	Q8WXH6	277 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	SEH1L	Q96EE3	360 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	C4orf36	Q96KX1	117 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	MDFI	Q99750	246 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	RASSF4	Q9H2L5	321 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	OPN4	Q9UHM6	478 aa		13.92	□□□□□ -0.18
ABCF3-218	ENST00000498136	LOC107986453	A0A1B0GWG9	222 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	ERICH4	A6NGS2	130 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	DHRS7C	A6NNS2	312 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	RNF212B	A8MTL3	300 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	TCF21	O43680	179 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	CCL1	P22362	96 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	GLRA1	P23415	457 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	CFHR2	P36980	270 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	KIR3DL2	P43630	455 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	ISL1	P61371	349 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	SRSF2	Q01130	221 aa	Known RBP	13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	RAB40B	Q12829	278 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	GALE	Q14376	348 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	KLHL22	Q53GT1	634 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	FAM76B	Q5HYJ3	339 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	ZNF691	Q5VV52	312 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	HAGHL	Q6PII5	290 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	KRT74	Q7RTS7	529 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	SLC36A1	Q7Z2H8	476 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	DHRSX	Q8N5I4	330 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR5T2	Q8NGG2	359 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR2G2	Q8NGZ5	317 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	ZNF671	Q8TAW3	534 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	APH1B	Q8WW43	257 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	CCL13	Q99616	98 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	ALG8	Q9BVK2	526 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	WDR13	Q9H1Z4	485 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	OR51I2	Q9H344	312 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	SNTG1	Q9NSN8	517 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	MYRF	Q9Y2G1	1151 aa		13.91	□□□□□ -0.18
ABCF3-218	ENST00000498136	DVL1	O14640	695 aa		13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	RHBDL1	O75783	438 aa		13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	RGS9	O75916	674 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	HAAO	P46952	286 aa		13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	SMN1	Q16637	294 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	TMEM244	Q5VVB8	128 aa		13.9	□□□□□ -0.18
ABCF3-218	ENST00000498136	CD276	Q5ZPR3	534 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms