RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 DCUN1D5Q9BTE7 237 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 FAIMQ9NVQ4 179 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 LAMP3Q9UQV4 416 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 ZNF732B4DXR9 585 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 IGHV1-46P01743 117 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 HNRNPA0Q13151 305 aaKnown RBP16.48■□□□□ 0.23
USP39-218ENST00000493829 SPSB1Q96BD6 273 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 DGCR14Q96DF8 476 aaKnown RBP16.48■□□□□ 0.23
USP39-218ENST00000493829 GPER1Q99527 375 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 MICU1Q9BPX6 476 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 RTL8AQ9BWD3 113 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 FAM192AQ9GZU8 254 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 CYSLTR2Q9NS75 346 aa16.48■□□□□ 0.23
USP39-218ENST00000493829 RAI1Q7Z5J4 1906 aaPredicted RBP16.48■□□□□ 0.23
USP39-218ENST00000493829 IGKV1-27A0A075B6S5 117 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.47■□□□□ 0.23
USP39-218ENST00000493829 PDCD5O14737 125 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 PRKACBP22694 351 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 EVX1P49640 407 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 MTCP1P56278 107 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 SWI5Q1ZZU3 235 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 SPRNQ5BIV9 151 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 AGAP6Q5VW22 663 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 PRAMEF6Q5VXH4 476 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 ZNF787Q6DD87 383 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 WDR86Q86TI4 376 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 ZNF611Q8N823 705 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 ITFG2Q969R8 447 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 MARVELD3Q96A59 401 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 TECTBQ96PL2 329 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 SLC22A4Q9H015 551 aa16.47■□□□□ 0.23
USP39-218ENST00000493829 PQLC2LA1A4F0 135 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 TPD52L2O43399 206 aaKnown RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 GRPP07492 148 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 ERCC1P07992 297 aaPredicted RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 DANCRP0C864 163 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 ZNF93P35789 620 aaPredicted RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 POU3F4P49335 361 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 HES5Q5TA89 166 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 ANGPTL5Q86XS5 388 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 NKAIN3Q8N8D7 197 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 VRK1Q99986 396 aaPredicted RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 CXXC4Q9H2H0 198 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 CBLN4Q9NTU7 201 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 CRYBG3Q68DQ2 2970 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 A0A0G2JK05 382 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 C17orf100A8MU93 164 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 ZNF701M0R085 212 aaPredicted RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 IL1AP01583 271 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 CD8AP01732 235 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 OR3A4PP47883 348 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 RBP2P50120 134 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 FUT6P51993 359 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 CCL8P80075 99 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 TNFAIP6P98066 277 aaPredicted RBP16.46■□□□□ 0.23
USP39-218ENST00000493829 KISS1Q15726 138 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 LHFPL2Q6ZUX7 228 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 KRT74Q7RTS7 529 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 TPRA1Q86W33 373 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 OR5A2Q8NGI9 324 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 OR2V2Q96R30 315 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 PLEKHF2Q9H8W4 249 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 PLGRKTQ9HBL7 147 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 NEK6Q9HC98 313 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 ABCB9Q9NP78 766 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 NKIRAS2Q9NYR9 191 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 V9GY05 133 aa16.46■□□□□ 0.23
USP39-218ENST00000493829 LOC100289279A0A1B0GTE1 492 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 OR5B21A6NL26 309 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 SLC2A2P11168 524 aaPredicted RBP16.45■□□□□ 0.22
USP39-218ENST00000493829 PRF1P14222 555 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 CLDN12P56749 244 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 GNG3P63215 75 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 MAB21L1Q13394 359 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 GLT8D1Q68CQ7 371 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 BATF2Q8N1L9 274 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 ITLN1Q8WWA0 313 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 NRGNQ92686 78 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 TRAF4Q9BUZ4 470 aaPredicted RBP16.45■□□□□ 0.22
USP39-218ENST00000493829 METTL17Q9H7H0 456 aaPredicted RBP16.45■□□□□ 0.22
USP39-218ENST00000493829 UFSP2Q9NUQ7 469 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 DAPK2Q9UIK4 370 aa16.45■□□□□ 0.22
USP39-218ENST00000493829 NOP16Q9Y3C1 178 aaKnown RBP16.45■□□□□ 0.22
USP39-218ENST00000493829 A0A0B4J203 849 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 A6NLC8 198 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 SPRY1O43609 319 aaPredicted RBP16.44■□□□□ 0.22
USP39-218ENST00000493829 ZNF182P17025 639 aaPredicted RBP16.44■□□□□ 0.22
USP39-218ENST00000493829 HAAOP46952 286 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 ATP1B3P54709 279 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 P2RY14Q15391 338 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 C11orf71Q6IPW1 123 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 SFXN4Q6P4A7 337 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 HAGHLQ6PII5 290 aaPredicted RBP16.44■□□□□ 0.22
USP39-218ENST00000493829 CRIP3Q6Q6R5 217 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 CALHM1Q8IU99 346 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 CACNG6Q9BXT2 260 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 BARHL1Q9BZE3 327 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 C14orf119Q9NWQ9 140 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms