RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SLC15A1P46059 708 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 RAB13P51153 203 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 IL5RAQ01344 420 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 BLMHQ13867 455 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 PLA1AQ53H76 456 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
SAMM50-204ENST00000493161 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 LHFPL4Q7Z7J7 247 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 C11orf42Q8N5U0 333 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 CSNK2A3Q8NEV1 391 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 TMEM185AQ8NFB2 350 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
SAMM50-204ENST00000493161 RNF133Q8WVZ7 376 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 PIGCQ92535 297 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 RNF170Q96K19 258 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SAMM50-204ENST00000493161 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 MED20Q9H944 212 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 IL20Q9NYY1 176 aa11.09□□□□□ -0.63
SAMM50-204ENST00000493161 COL7A1Q02388 2944 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 ANXA2P2A6NMY6 339 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 COX7A1P24310 79 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OPRL1P41146 370 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 GPM6AP51674 278 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 SLC25A1P53007 311 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 PPP1R8Q12972 351 aaKnown RBP11.08□□□□□ -0.64
SAMM50-204ENST00000493161 AANATQ16613 207 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 VAX1Q5SQQ9 334 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 ZNF770Q6IQ21 691 aaPredicted RBP11.08□□□□□ -0.64
SAMM50-204ENST00000493161 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 Q6ZS46 218 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 ERI1Q8IV48 349 aaKnown RBP11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OR52H1Q8NGJ2 320 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OR5D13Q8NGL4 314 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OR6N2Q8NGY6 317 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 PGAM5Q96HS1 289 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OR5M11Q96RB7 305 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 TSSK6Q9BXA6 273 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 OR10A2Q9H208 303 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 YY1AP1Q9H869 796 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 TBC1D23Q9NUY8 699 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 MPC1Q9Y5U8 109 aa11.08□□□□□ -0.64
SAMM50-204ENST00000493161 FAM183AA6NL82 134 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TMEM210A6NLX4 147 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 CCDC22O60826 627 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 GMNNO75496 209 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 SOX14O95416 240 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 MPIG6BO95866 241 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 CST4P01036 141 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 IGLL1P15814 213 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 GLRA1P23415 457 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
SAMM50-204ENST00000493161 EMX1Q04741 257 aaPredicted RBP11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TMEM200BQ69YZ2 307 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 RPL13AP3Q6NVV1 102 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 RASSF6Q6ZTQ3 369 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TIGD4Q8IY51 512 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 Q8N2B8 174 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 CD177Q8N6Q3 437 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 OR4S1Q8NGB4 309 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 RAB18Q9NP72 206 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 ARMC1Q9NVT9 282 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TAS2R1Q9NYW7 299 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 LYVE1Q9Y5Y7 322 aa11.07□□□□□ -0.64
SAMM50-204ENST00000493161 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 K7EIL1 84 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 CCL3L1P16619 93 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 CAPZA1P52907 286 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 HMGA2P52926 109 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 LDLRAD2Q5SZI1 272 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 OR4M1Q8NGD0 313 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 SDSLQ96GA7 329 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 ZNF488Q96MN9 340 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 INTS14Q96SY0 518 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 CDCA4Q9BXL8 241 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 OR51I2Q9H344 312 aa11.06□□□□□ -0.64
SAMM50-204ENST00000493161 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 ZNF732B4DXR9 585 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 TNFRSF11BO00300 401 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 ARPC2O15144 300 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 H2BFMP0C1H6 154 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 H2AFXP16104 143 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-204ENST00000493161 JUNBP17275 347 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-204ENST00000493161 GSTT1P30711 240 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-204ENST00000493161 ZNF273Q14593 569 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 TMEM95Q3KNT9 176 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 CEP78Q5JTW2 689 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 ZNF782Q6ZMW2 699 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-204ENST00000493161 LIAT1Q6ZQX7 453 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 CPLX4Q7Z7G2 160 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 ZDHHC23Q8IYP9 409 aa11.05□□□□□ -0.64
SAMM50-204ENST00000493161 FTMTQ8N4E7 242 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms