RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZNF154Q13106 437 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 CNN3Q15417 329 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 MPPED2Q15777 294 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 UBE2V2Q15819 145 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 PRAMEF6Q5VXH4 476 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 C11orf53Q8IXP5 236 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 CCL17Q92583 94 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 THRSPQ92748 146 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 FN3KRPQ9HA64 309 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 TMEM106BQ9NUM4 274 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 SLC7A11Q9UPY5 501 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 CACNG2Q9Y698 323 aa16.36■□□□□ 0.21
PCOLCE-208ENST00000487172 VWC2LB2RUY7 222 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 ZNF732B4DXR9 585 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 GRPP07492 148 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 ATF1P18846 271 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 PMELP40967 661 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 SOX2P48431 317 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 TRAM1Q15629 374 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 ARMCX4Q5H9R4 360 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 LIPKQ5VXJ0 399 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 UNQ9370/PRO34162Q6UXP9 181 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 SPNS3Q6ZMD2 512 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 MOGAT3Q86VF5 341 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 DNAAF1Q8NEP3 725 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 WFDC11Q8NEX6 87 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 OR5D14Q8NGL3 314 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 OR13C5Q8NGS8 318 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 ZNF420Q8TAQ5 688 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 TMEM106AQ96A25 262 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 Q96MF0 132 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 ZCCHC4Q9H5U6 513 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 CSMD1Q96PZ7 3565 aa16.35■□□□□ 0.21
PCOLCE-208ENST00000487172 LRP5LA4QPB2 252 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 ZNF879B4DU55 563 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 SLC25A16P16260 332 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 GPM6AP51674 278 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 FUT6P51993 359 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 ZNF529Q6P280 563 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 TGIF2LYQ8IUE0 185 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 PHC2Q8IXK0 858 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 OR11L1Q8NGX0 322 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 HPS1Q92902 700 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 PIMREGQ9BSJ6 248 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 OR51I2Q9H344 312 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 TREM2Q9NZC2 230 aa16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 SF3B6Q9Y3B4 125 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-208ENST00000487172 IGHV4-30-2A0A087WSY4 118 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 TRBV5-7A0A0A0MS05 114 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 IGHV3-64DA0A0J9YX35 117 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 PQLC2LA1A4F0 135 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 LRRC30A6NM36 301 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 CLDN25C9JDP6 229 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 TMEM178BH3BS89 294 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 GPX5O75715 221 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 SC5DO75845 299 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 FSTL3O95633 263 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 PRKACBP22694 351 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 PSMA1P25786 263 aaKnown RBP16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 CFHR2P36980 270 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 CARTPTQ16568 116 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 SYT6Q5T7P8 510 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 KCTD8Q6ZWB6 473 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 ZNF573Q86YE8 665 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 C1orf87Q8N0U7 546 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 SPSB1Q96BD6 273 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 NEK6Q9HC98 313 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 UFSP2Q9NUQ7 469 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 RNF7Q9UBF6 113 aa16.33■□□□□ 0.2
PCOLCE-208ENST00000487172 IRF2P14316 349 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 AZGP1P25311 298 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 MAPK3P27361 379 aaPredicted RBP16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 NR4A2P43354 598 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 GPR6P46095 362 aaPredicted RBP16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 ACSM3Q53FZ2 586 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 ASPHD2Q6ICH7 369 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 WDR82Q6UXN9 313 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 PEG10Q86TG7 708 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 SCCPDHQ8NBX0 429 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 OR13C9Q8NGT0 318 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 OR10Z1Q8NGY1 313 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 BORCS8Q96FH0 119 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 OR14A2Q96R54 314 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 TMED9Q9BVK6 235 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 BPESC1Q9GZL8 116 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 C1orf123Q9NWV4 160 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 NPTNQ9Y639 398 aa16.32■□□□□ 0.2
PCOLCE-208ENST00000487172 A6NLC8 198 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 CDIPTO14735 213 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 PPIHO43447 177 aaKnown RBP16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 SULT1B1O43704 296 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 INMTO95050 263 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 LHBP01229 141 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 IGFBP3P17936 291 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 RAB3AP20336 220 aa16.31■□□□□ 0.2
PCOLCE-208ENST00000487172 GABRA5P31644 462 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms