RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 INTS9Q9NV88 658 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 GID8Q9NWU2 228 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4Q9UBX2 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 Q9UF83 564 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF107Q9UII5 783 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 GNPTGQ9UJJ9 305 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CES1P1Q9UKY3 287 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MRPS18CQ9Y3D5 142 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SNX10Q9Y5X0 201 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 HS3ST3B1Q9Y662 390 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MRPS18BQ9Y676 258 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CACNA1FO60840 1977 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RGPD2P0DJD1 1756 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 IGLV5-39A0A0G2JS06 123 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SMIM28A0A1B0GU29 152 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 A0A1B0GVT2 93 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 A0A1B0GWB2 263 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 A0A1W2PS18 150 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 EFCAB10A6NFE3 127 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 IGLON5A6NGN9 336 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 EPOPA6NHQ4 379 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 EFCAB9A8MZ26 197 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 INAFM1C9JVW0 142 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 E9PLD3 99 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CXCR6O00574 342 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ACOT8O14734 319 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PHYHO14832 338 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 RAD51CO43502 376 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 STX10O60499 249 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR2B3O76000 313 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 DHFRP00374 187 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ARG1P05089 322 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CD55P08174 381 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 HIST1H1EP10412 219 aaKnown RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 UGT2B7P16662 529 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 MYL12AP19105 171 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 AK4P27144 223 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CHRNB4P30926 498 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 HTR1FP30939 366 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 GSSP48637 474 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 HCAR3P49019 387 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SULT1A1P50225 295 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SULT1A2P50226 295 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SERPINB8P50452 374 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 RORCP51449 518 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SUB1P53999 127 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 DVL1P1P54792 670 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 MFAP2P55001 183 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF121P58317 390 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 BRWD1-AS2P59051 145 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 TFAMQ00059 246 aaKnown RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SEMG2Q02383 582 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 TGFBR3Q03167 851 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PUDPQ08623 228 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SLC10A2Q12908 348 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 IL18R1Q13478 541 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PRPSAP1Q14558 356 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 NFATC4Q14934 902 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 DAZAP2Q15038 168 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PON3Q15166 354 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 GUSBP1Q15486 140 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 TEAD2Q15562 447 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ATP6AP1Q15904 470 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 IZUMO4Q1ZYL8 232 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CLEC12BQ2HXU8 276 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CCDC58Q4VC31 144 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZCWPW2Q504Y3 356 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR10J3Q5JRS4 329 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 VAX1Q5SQQ9 334 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 LINC00242Q5T6M2 205 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 C10orf25Q5T742 122 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF790Q6PG37 636 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM179Q6ZVK1 233 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 FAM19A1Q7Z5A9 133 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 LYG2Q86SG7 212 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 APLFQ8IW19 511 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 SKA3Q8IX90 412 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 LGI3Q8N145 548 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 FTMTQ8N4E7 242 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF557Q8N988 423 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 KBTBD8Q8NFY9 601 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR51D1Q8NGF3 324 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR2A1Q8NGT9 310 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR4C3Q8NH37 302 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR51Q1Q8NH59 317 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 LNX1Q8TBB1 728 aaPredicted RBP2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZFAND1Q8TCF1 268 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 C16orf78Q8WTQ4 265 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 RNF138Q8WVD3 245 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 OR5P2Q8WZ92 322 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 EXTL1Q92935 676 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PIK3IP1Q96FE7 263 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 CMTM7Q96FZ5 175 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF681Q96N22 645 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 NODALQ96S42 347 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 GPR22Q99680 433 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 PDCD1LG2Q9BQ51 273 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
HMGN4-202ENST00000477243 DDA1Q9BW61 102 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms