RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PLA1AQ53H76 456 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DEFB121Q5J5C9 76 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 AGBL2Q5U5Z8 902 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 METTL21CQ5VZV1 264 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DCXRQ7Z4W1 244 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 LHFPL4Q7Z7J7 247 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 CYP4Z1Q86W10 505 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 MKXQ8IYA7 352 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM185AQ8N0U4 392 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DYNAPQ8N1N2 210 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 C11orf42Q8N5U0 333 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNRF1Q8ND25 227 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 PROKR2Q8NFJ6 384 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 OR4C15Q8NGM1 316 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 OR5K1Q8NHB7 308 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DYDC1Q8WWB3 177 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNRF4Q8WWF5 429 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 RPL3LQ92901 407 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 REEP6Q96HR9 211 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 RCC1LQ96I51 464 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DHRS1Q96LJ7 313 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 OR5M11Q96RB7 305 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 KCNJ15Q99712 375 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 FUZQ9BT04 418 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 GPR61Q9BZJ8 451 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 PRSS22Q9GZN4 317 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 FGF23Q9GZV9 251 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 NSRP1Q9H0G5 558 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 OR52D1Q9H346 318 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 CMTM6Q9NX76 183 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 NDUFAF4Q9P032 175 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF222Q9UK12 451 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 RHBDD3Q9Y3P4 386 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 LRP12Q9Y561 859 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 N6AMT1Q9Y5N5 214 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 COMMD3-BMI1R4GMX3 469 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 TVP23AA6NH52 213 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM210A6NLX4 147 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 OR2AT4A6NND4 320 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ODF3BA8MYP8 253 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF878C9JN71 531 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 TBX1O43435 398 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SYNGR1O43759 233 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 IDH3BO43837 385 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 EDF1O60869 148 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 DUS4LO95620 317 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SERPINA1P01009 418 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ALDOBP05062 364 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ANXA2P07355 339 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 PSG2P11465 335 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 RHCEP18577 417 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 PAICSP22234 425 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 CFL1P23528 166 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 COX7A1P24310 79 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ACKR3P25106 362 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 POU1F1P28069 291 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 HOXD3P31249 432 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 GNALP38405 381 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 VDAC2P45880 294 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 CX3CR1P49238 355 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 RAB13P51153 203 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC7A2P52569 658 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 LGALS4P56470 323 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ERVFRD-1P60508 538 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 BLCAPP62952 87 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 IL5RAQ01344 420 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 KLF10Q13118 480 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 TIGD6Q17RP2 521 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM76BQ5HYJ3 339 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 LDLRAD2Q5SZI1 272 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC35F1Q5T1Q4 408 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 CCDC121Q6ZUS5 278 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 FKBP9P1Q75LS8 142 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 PRSS45Q7RTY3 260 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 ZDHHC13Q8IUH4 622 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC15A3Q8IY34 581 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM185AQ8NFB2 350 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 OR5AU1Q8NGC0 362 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 OR51L1Q8NGJ5 315 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 RPS4Y2Q8TD47 263 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 HPSE2Q8WWQ2 592 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SGK3Q96BR1 496 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 FOXRED1Q96CU9 486 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SLAMF6Q96DU3 332 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 C7orf34Q96L11 122 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 MICU1Q9BPX6 476 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 SIKE1Q9BRV8 207 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 IFT27Q9BW83 186 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 RTL8AQ9BWD3 113 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 MUC13Q9H3R2 512 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 KRCC1Q9NPI7 259 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 INPP5EQ9NRR6 644 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 C19orf12Q9NSK7 152 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 CENPMQ9NSP4 180 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 GID8Q9NWU2 228 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms