RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 NELFAQ9H3P2 528 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 PISDQ9UG56 409 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TMEM14DPA8MWL7 114 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 SEC14L6B5MCN3 397 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TSTD3H0UI37 97 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 HCRTR2O43614 444 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 NSA2O95478 260 aaKnown RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 QDPRP09417 244 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TAGLN2P37802 199 aaKnown RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 GPR3P46089 330 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 OR3A4PP47883 348 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 USF2Q15853 346 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 COMMD1Q8N668 190 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 TMEM184BQ9Y519 407 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-207ENST00000470763 GON4LQ3T8J9 2241 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 SEC16AO15027 2179 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 CEACAM18A8MTB9 384 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 CYB5BO43169 146 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 DIRAS3O95661 229 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 ISG15P05161 165 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF823P16415 610 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 MAS1LP35410 378 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 ELOBQ15370 118 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 FNDC7Q5VTL7 733 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 C1orf140Q5VVS0 124 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 CDCP2Q5VXM1 449 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 PLXDC2Q6UX71 529 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 RAB39BQ96DA2 213 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 B3GALT5Q9Y2C3 310 aa12.16□□□□□ -0.46
NPHP4-207ENST00000470763 CNTRLQ7Z7A1 2325 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 H0YL77 283 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 H2BFMP0C1H6 154 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 SNU13P55769 128 aaKnown RBP12.15□□□□□ -0.46
NPHP4-207ENST00000470763 UCP2P55851 309 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 SLC26A5P58743 744 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 PKIAP61925 76 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-207ENST00000470763 COMMD2Q86X83 199 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 TGIF2LXQ8IUE1 241 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF321PQ8N8H1 164 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 OSGIN2Q9Y236 505 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
NPHP4-207ENST00000470763 H3BQ15 152 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 TTRP02766 147 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 CCL20P78556 96 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 GGNBP1Q5YKI7 109 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 LHFPL1Q86WI0 220 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 BAHD1Q8TBE0 780 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-207ENST00000470763 SCGB3A2Q96PL1 93 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 CRLF2Q9HC73 371 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 C1orf123Q9NWV4 160 aa12.15□□□□□ -0.46
NPHP4-207ENST00000470763 CRTAPO75718 401 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 UTS2O95399 124 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 HEXBP07686 556 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 GLI4P10075 376 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 RABIFP47224 123 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 SEC13P55735 322 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 UBE2V2Q15819 145 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 HAGHQ16775 308 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 AVL9Q8NBF6 648 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 OR14K1Q8NGZ2 314 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 RP1P56715 2156 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 OR5H1A6NKK0 313 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 A8MVM7 634 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 BCAT2O15382 392 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 CDC14BO60729 498 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 GUSBP08236 651 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 SEC11BP0C7V7 166 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 UBE2KP61086 200 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 RPS21P63220 83 aaKnown RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 ZNF117Q03924 483 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 OR5D18Q8NGL1 313 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 RSC1A1Q92681 617 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 CCNL2Q96S94 520 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 TXNIPQ9H3M7 391 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
NPHP4-207ENST00000470763 IGKV1D-43A0A0B4J1Z2 117 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 CDC14CA4D256 554 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 FIGNL2A6NMB9 653 aa12.14□□□□□ -0.47
NPHP4-207ENST00000470763 SCGNO76038 276 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms