RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SCCPDHQ8NBX0 429 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 OR10Z1Q8NGY1 313 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 GCDHQ92947 438 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 SEH1LQ96EE3 360 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 RNF170Q96K19 258 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 C1orf147Q96MC9 270 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 DUX5Q96PT3 197 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 HIST1H2AAQ96QV6 131 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 TBX5Q99593 518 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 CCL13Q99616 98 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 RASSF4Q9H2L5 321 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 HAO2Q9NYQ3 351 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 DNAJB11Q9UBS4 358 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 WARS2Q9UGM6 360 aaKnown RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 ENPP5Q9UJA9 477 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 PIGLQ9Y2B2 252 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 R4GMQ9 66 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 MDFIC2A0A1B0GVS7 189 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 OR5B21A6NL26 309 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF732B4DXR9 585 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 P2RY10O00398 339 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 MAGEB4O15481 346 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 AKR7A2O43488 359 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 MTRF1O75570 445 aaKnown RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 TOX4O94842 621 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 APOL3O95236 402 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 ECDO95905 644 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 KRT8P05787 483 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 LIPFP07098 398 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 MMP9P14780 707 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 PRTN3P24158 256 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 HTR1FP30939 366 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 POLR2IP36954 125 aaKnown RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 CDC42P60953 191 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 ACTR3P61158 418 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 GNG3P63215 75 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 RIPPLY1Q0D2K3 151 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 IKZF1Q13422 519 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 KPNB1Q14974 876 aaKnown RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 C11orf91Q3C1V1 193 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 CEACAM21Q3KPI0 293 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 ZBTB37Q5TC79 503 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 RUSC1-AS1Q66K80 236 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 KRT74Q7RTS7 529 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 SSX6Q7RTT6 188 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 FGFRL1Q8N441 504 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 OR8J1Q8NGP2 316 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 ITFG2Q969R8 447 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 WDFY2Q96P53 400 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 RAB3IPQ96QF0 476 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 TBX15Q96SF7 602 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 APOL4Q9BPW4 351 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 OSBPL10Q9BXB5 764 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 WDR13Q9H1Z4 485 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 SNTG1Q9NSN8 517 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 MRM2Q9UI43 246 aaKnown RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 RPUSD1Q9UJJ7 312 aaKnown RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 OR52A1Q9UKL2 312 aa8.42□□□□□ -1.06
SF3A3-204ENST00000462258 SOX21Q9Y651 276 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-204ENST00000462258 H3BNX3 289 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 EI24O14681 340 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 NDUFB3O43676 98 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 RHBDL1O75783 438 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 RPP14O95059 124 aaKnown RBP8.41□□□□□ -1.06
SF3A3-204ENST00000462258 ALPLP05186 524 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
SF3A3-204ENST00000462258 SELLP14151 372 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 GLRA1P23415 457 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 CFPP27918 469 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 LRRC10Q5BKY1 277 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 DMRTC1Q5HYR2 192 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF684Q5T5D7 378 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 MOB3CQ70IA8 216 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 YIPF7Q8N8F6 280 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 OR10H4Q8NGA5 316 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 RFKQ969G6 155 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 PPP1R14AQ96A00 147 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 SLC25A28Q96A46 364 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 GAFA1Q96PS6 74 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 SIRPDQ9H106 197 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 DNTTIP1Q9H147 329 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 IMPAD1Q9NX62 359 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 ONECUT1Q9UBC0 465 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 NLKQ9UBE8 527 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 ORC6Q9Y5N6 252 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 SNX5Q9Y5X3 404 aa8.41□□□□□ -1.06
SF3A3-204ENST00000462258 A0A1W2PQL4 384 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-204ENST00000462258 CLDN34H7C241 214 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 GPR37O15354 613 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 NRASP01111 189 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 TFF1P04155 84 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 OR2T7P0C7T2 308 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 HKR1P10072 659 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 AMY2BP19961 511 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 BPIFB3P59826 476 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 ARF6P62330 175 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 IL13RA1P78552 427 aa8.4□□□□□ -1.06
SF3A3-204ENST00000462258 TMED1Q13445 227 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms